RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 IKZF2Q9UKS7 526 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 NAP1L2Q9ULW6 460 aaPredicted RBP2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 TMCO1Q9UM00 188 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 ABCG2Q9UNQ0 655 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 UBIAD1Q9Y5Z9 338 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 MYO9BQ13459 2157 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 C5orf42Q9H799 3197 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNFX1Q9P2E3 1918 aaKnown RBP2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 MYO7AQ13402 2215 aa2.48□□□□□ -2.01
TRAPPC11-205ENST00000506426 GPR179Q6PRD1 2367 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 TECTAO75443 2155 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 SIP14410 1827 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 IGSF9BQ9UPX0 1349 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 A0A075B6Q4 140 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 A0A1B0GUS0 222 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 TCRBV9S1A1TA0A576 114 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 FRG2CA6NGY1 282 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 VSTM2BA6NLU5 285 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 KRTAP16-1A8MUX0 517 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF705EA8MWA4 302 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 LOC730098B7Z3J9 87 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 M0QZ92 97 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 HIP1O00291 1037 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF254O75437 659 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 UPK3AO75631 287 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 FOLR2P14207 255 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ATP1B2P14415 290 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 VDAC1P21796 283 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 GALP22466 123 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 CALCRP30988 508 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 IL2RGP31785 369 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 CRYBB2P43320 205 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 VEGFCP49767 419 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 PKNOX1P55347 436 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 CXCL6P80162 114 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 CDK16Q00536 496 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 CCDC173Q0VFZ6 552 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ASPHQ12797 758 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 DUSP7Q16829 419 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 TIMM50Q3ZCQ8 353 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 PAN3Q58A45 887 aaKnown RBP2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 CLLU1OSQ5K130 101 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 RNASEKQ6P5S7 137 aaKnown RBP2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 UQCC3Q6UW78 93 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ENPP6Q6UWR7 440 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 TMEM107Q6UX40 140 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 GDPD3Q7L5L3 318 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ASCL5Q7RTU5 278 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 METTL13Q8N6R0 699 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 TMEM105Q8N8V8 129 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR52H1Q8NGJ2 320 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF641Q96N77 438 aaPredicted RBP2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 RANBP9Q96S59 729 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 RNF2Q99496 336 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 FMO2Q99518 471 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 SPZ1Q9BXG8 430 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 SRXN1Q9BYN0 137 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 NMUR2Q9GZQ4 415 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 GFRA4Q9GZZ7 299 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 NCOR1P1Q9H4R4 102 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ANKRD19PQ9H560 264 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 POMKQ9H5K3 350 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 NIPAL2Q9H841 368 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 PSTPIP2Q9H939 334 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 NT5MQ9NPB1 228 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 KLHL28Q9NXS3 571 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 PAK5Q9P286 719 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 SLC7A8Q9UHI5 535 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 N6AMT1Q9Y5N5 214 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 ZNF318Q5VUA4 2279 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 EPG5Q9HCE0 2579 aa2.47□□□□□ -2.01
TRAPPC11-205ENST00000506426 TRIOO75962 3097 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 SPTBN4Q9H254 2564 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 IGLV3-22A0A075B6J6 115 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 A0A087WWV3 80 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 IGHV3-35A0A0C4DH35 117 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 KLF18A0A0U1RQI7 1052 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 A0A1W2PPE3 182 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 SMCO2A6NFE2 343 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RNF13O43567 381 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 UGT1A9O60656 530 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 SLITRK3O94933 977 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 TDP2O95551 362 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 OXSR1O95747 527 aaPredicted RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CALM1P0DP23 149 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CALM2P0DP24 149 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 CALM3P0DP25 149 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 TNNI1P19237 187 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 IL12AP29459 219 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 UGT1A3P35503 534 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 OPRD1P41143 372 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 RPS14P62263 151 aaKnown RBP2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 SIGLEC14Q08ET2 396 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 GK3PQ14409 553 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 ARL6IP1Q15041 203 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 OXA1LQ15070 435 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 AANATQ16613 207 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 BCL7AQ4VC05 210 aa2.46□□□□□ -2.02
TRAPPC11-205ENST00000506426 EIPR1Q53HC9 387 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms