RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CCL21O00585 134 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 ANGPTL7O43827 346 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 ERLIN2O94905 339 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 C1orf105O95561 183 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 PPIAL4FP0DN26 164 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 ATP1B2P14415 290 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 EPS15P42566 896 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 GYG1P46976 350 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 SLAQ13239 276 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 GK3PQ14409 553 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 H2BFWTQ7Z2G1 175 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 C12orf56Q8IXR9 622 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 SDR9C7Q8NEX9 313 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 IFT74Q96LB3 600 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 FOPNLQ96NB1 174 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 ROPN1BQ9BZX4 212 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 TMCC3Q9ULS5 477 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 MYO10Q9HD67 2058 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 WDR62O43379 1518 aa2.41□□□□□ -2.02
TOPBP1-204ENST00000505804 IGKV2-28A0A075B6P5 120 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 A0A1W2PPV9 198 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 CIB4A0PJX0 185 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF726A6NNF4 738 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 AIREO43918 545 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 IGKV2D-28P01615 120 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 BGLAPP02818 100 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 ZDHHC11BP0C7U3 371 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 VHLP40337 213 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 YAP1P46937 504 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 TFPI2P48307 235 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 UBE2AP49459 152 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 CCR8P51685 355 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 NCBP2P52298 156 aaKnown RBP eCLIP2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 EIF4EBP1Q13541 118 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 TTLL9Q3SXZ7 439 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 KCTD21Q4G0X4 260 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 C6orf226Q5I0X4 101 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 LRRC74BQ6ZQY2 392 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 CYB561D1Q8N8Q1 229 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 OR4F6Q8NGB9 312 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 CD300LFQ8TDQ1 290 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 ZBTB18Q99592 522 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 TM9SF3Q9HD45 589 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 HYPKQ9NX55 129 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 SLC7A8Q9UHI5 535 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 PIKFYVEQ9Y2I7 2098 aa2.4□□□□□ -2.03
TOPBP1-204ENST00000505804 CARMIL3Q8ND23 1372 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 A0A1W2PPE3 182 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 KMOO15229 486 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 WISP3O95389 354 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 TLX1NBP0CAT3 122 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 SMIM10L1P0DMW3 83 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 ZNF823P16415 610 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 MX1P20591 662 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 OMGP23515 440 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 RORCP51449 518 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 FBXW4P57775 412 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 ENPEPQ07075 957 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 ARHGAP19Q14CB8 494 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 ZMYND11Q15326 602 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 H2AFVQ71UI9 128 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 LHFPL3Q86UP9 236 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 TGIF2LXQ8IUE1 241 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 PSTKQ8IV42 348 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 MREGQ8N565 214 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 OR10G2Q8NGC3 310 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 SLC22A8Q8TCC7 542 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 EXOSC8Q96B26 276 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 SMIM10Q96HG1 83 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 BMFQ96LC9 184 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 TSSK3Q96PN8 268 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 OSBPL10Q9BXB5 764 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 NT5C3AQ9H0P0 336 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 SLC40A1Q9NP59 571 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 INPP5EQ9NRR6 644 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 NECAP2Q9NVZ3 263 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 CTNNA3Q9UI47 895 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 KIAA1257Q9ULG3 409 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 PEX16Q9Y5Y5 336 aa2.39□□□□□ -2.03
TOPBP1-204ENST00000505804 KANK1Q14678 1352 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 ARHGEF35A5YM69 484 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 CXCL11O14625 94 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 ENTPD5O75356 428 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 C2P06681 752 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 RETP07949 1114 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 IGFBP3P17936 291 aaPredicted RBP2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 CDKN1BP46527 198 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 TPMTP51580 245 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 MNAT1P51948 309 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 UGT2B15P54855 530 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 CDH4P55283 916 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 SLC7A9P82251 487 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 BST1Q10588 318 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 C16orf72Q14CZ0 275 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 FAM83EQ2M2I3 478 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 PHYHD1Q5SRE7 291 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 C19orf35Q6ZS72 473 aa2.38□□□□□ -2.03
TOPBP1-204ENST00000505804 STRADAQ7RTN6 431 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms