RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 BOD1L1Q8NFC6 3051 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 PRR32B1ATL7 298 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ACOT7O00154 380 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 SERPINI2O75830 405 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ZNF432O94892 652 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 FADS2O95864 444 aaKnown RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 LCKP06239 509 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 LIMS3P0CW19 117 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 LIMS4P0CW20 117 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 PGA4P0DJD7 388 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 PGA3P0DJD8 388 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 CTLA4P16410 223 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ZNF24P17028 368 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 AHCYP23526 432 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 PYCR1P32322 319 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 RPL5P46777 297 aaKnown RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 ZNF133P52736 654 aaPredicted RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 SLC16A1P53985 500 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 NR1H2P55055 460 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 UCNP55089 124 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 CSNK2A1P68400 391 aaPredicted RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 RAB40BQ12829 278 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 TMED1Q13445 227 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 HIST3H3Q16695 136 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 UBE2UQ5VVX9 321 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ZNF324BQ6AW86 544 aaPredicted RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 RPUSD3Q6P087 351 aaKnown RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 PLXDC2Q6UX71 529 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 CREB3L2Q70SY1 520 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ADGRE4PQ86SQ3 457 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 SATL1Q86VE3 508 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 PM20D2Q8IYS1 436 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 UBQLNLQ8IYU4 475 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 TMEM123Q8N131 208 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 OR6V1Q8N148 313 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ZADH2Q8N4Q0 377 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 OR51L1Q8NGJ5 315 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ZNF385AQ96PM9 386 aaKnown RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 TEAD3Q99594 435 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 EMC6Q9BV81 110 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 PRDM14Q9GZV8 571 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 SYT4Q9H2B2 425 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 MARCH7Q9H992 704 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 RPRD1BQ9NQG5 326 aaKnown RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 TNFRSF10DQ9UBN6 386 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 GRHPRQ9UBQ7 328 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 WARS2Q9UGM6 360 aaKnown RBP9.25□□□□□ -0.93
TPM3-217ENST00000504663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.25□□□□□ -0.93
TPM3-217ENST00000504663 RASD1Q9Y272 281 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
TPM3-217ENST00000504663 A0A1W2PRG6 482 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SLC22A31A6NKX4 558 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ZNHIT1O43257 154 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ARHGEF9O43307 516 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SELENOFO60613 162 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 EIF1BO60739 113 aaKnown RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 CYTIPO60759 359 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SEC14L2O76054 403 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 GLCEO94923 617 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 INMTO95050 263 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 OR6A2O95222 327 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 GPANK1O95872 356 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ACTL6AO96019 429 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SBK2P0C263 348 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 GAAP10253 952 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 CPN1P15169 458 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 EEF1B2P24534 225 aaKnown RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 EDNRAP25101 427 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 GTF2E2P29084 291 aaKnown RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 TGFBR2P37173 567 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ETV1P50549 477 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 DAP3P51398 398 aaKnown RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 BIDP55957 195 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ZNF85Q03923 595 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 FMODQ06828 376 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 RAB39AQ14964 217 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SLC10A1Q14973 349 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 NEDD8Q15843 81 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ETFDHQ16134 617 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 PLEKHN1Q494U1 663 aaPredicted RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 SLC35D3Q5M8T2 416 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 PHYHD1Q5SRE7 291 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SYT6Q5T7P8 510 aaPredicted RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 FAM205BPQ63HN1 556 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SSX6Q7RTT6 188 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 UEVLDQ8IX04 471 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 TIGD4Q8IY51 512 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 NOXO1Q8NFA2 376 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 OR9K2Q8NGE7 335 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 OR13F1Q8NGS4 319 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 OR6X1Q8NH79 312 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 RNF128Q8TEB7 428 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 SMAP2Q8WU79 429 aaPredicted RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 ZCCHC14Q8WYQ9 949 aaKnown RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 ROBO4Q8WZ75 1007 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 TM9SF4Q92544 642 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 RFKQ969G6 155 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 MYDGFQ969H8 173 aa9.24□□□□□ -0.93
TPM3-217ENST00000504663 ABTB1Q969K4 478 aaPredicted RBP9.24□□□□□ -0.93
TPM3-217ENST00000504663 TMEM54Q969K7 222 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms