RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 AQP12AQ8IXF9 295 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 FAM46AQ96IP4 442 aaKnown RBP15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 ALPK1Q96QP1 1244 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 TXNIPQ9H3M7 391 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 RNF115Q9Y4L5 304 aa15.95■□□□□ 0.14
PDLIM7-209ENST00000503346 POLQO75417 2590 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 TRMUO75648 421 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 PLAUP00749 431 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 ACADSP16219 412 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 HMGA2P52926 109 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 UBE2NP61088 152 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 CHRNB3Q05901 458 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 ZBED5Q49AG3 693 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 ADAM5Q6NVV9 412 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 LRFN4Q6PJG9 635 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 KLHL17Q6TDP4 642 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 TMEM108Q6UXF1 575 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 ZER1Q7Z7L7 766 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 CADM1Q9BY67 442 aaKnown RBP15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 POFUT2Q9Y2G5 429 aa15.94■□□□□ 0.14
PDLIM7-209ENST00000503346 A0A096LPE4 126 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 A0A1W2PPZ6 126 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 PTP4A3O75365 173 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 ATE1O95260 518 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 RAF1P04049 648 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF26P17031 533 aaPredicted RBP15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 PTAFRP25105 342 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 CD40P25942 277 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF83P51522 516 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 CLRN1P58418 232 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 CTXN1P60606 82 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 RPL27P61353 136 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 FAM205BPQ63HN1 556 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 IGFN1Q86VF2 1251 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 CCDC36Q8IYA8 594 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 ADGRG5Q8IZF4 528 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 NOXO1Q8NFA2 376 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 RADILQ96JH8 1075 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 GPA33Q99795 319 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 FOXB1Q99853 325 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 UBTD1Q9HAC8 227 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 MOV10Q9HCE1 1003 aaKnown RBP15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 TMCC3Q9ULS5 477 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 AURKCQ9UQB9 309 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 POMPQ9Y244 141 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 SIGLEC7Q9Y286 467 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 PLEKHA6Q9Y2H5 1048 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 LYVE1Q9Y5Y7 322 aa15.93■□□□□ 0.14
PDLIM7-209ENST00000503346 M0R1B8 84 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 RAP2AP10114 183 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 HOXB6P17509 224 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 DNASE1P24855 282 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 IFNGR2P38484 337 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF133P52736 654 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 TOP3AQ13472 1001 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 FLOT2Q14254 428 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 C20orf204Q6ZNR8 217 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 FAM169BQ8N8A8 192 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 OR4C15Q8NGM1 316 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 LILRB1Q8NHL6 650 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 AKAP1Q92667 903 aaKnown RBP eCLIP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 HDAC2Q92769 488 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 MCHR2Q969V1 340 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 NMD3Q96D46 503 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 MBD6Q96DN6 1003 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 RSRC1Q96IZ7 334 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 GPX7Q96SL4 187 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 C1QTNF6Q9BXI9 259 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 NDEL1Q9GZM8 345 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 CCM2LQ9NUG4 571 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 CRNNQ9UBG3 495 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 SLC7A8Q9UHI5 535 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF346Q9UL40 294 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 MGAT4BQ9UQ53 548 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 SPG11Q96JI7 2443 aa15.92■□□□□ 0.14
PDLIM7-209ENST00000503346 DHRS12A0PJE2 317 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 UNC119BA6NIH7 251 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 TNFRSF11BO00300 401 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 ABCD4O14678 606 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 HS3ST1O14792 307 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 DHHO43323 396 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 OR10H3O60404 316 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 SEC14L2O76054 403 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 NDUFB2O95178 105 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 CD14P08571 375 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 QDPRP09417 244 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 CD53P19397 219 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 FPR3P25089 353 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 IST1P53990 364 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 KEAP1Q14145 624 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 C3orf36Q3SXR2 165 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF813Q6ZN06 617 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 SYT14Q8NB59 555 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 ZNF519Q8TB69 540 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 TSPAN32Q96QS1 320 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 KCNK17Q96T54 332 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 ALG12Q9BV10 488 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 KATNB1Q9BVA0 655 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 CHID1Q9BWS9 393 aa15.91■□□□□ 0.14
PDLIM7-209ENST00000503346 PRR14LQ5THK1 2151 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms