RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 DMRTB1Q96MA1 342 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NRSN2Q9GZP1 204 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 SYT4Q9H2B2 425 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 TXNIPQ9H3M7 391 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 PLEKHA1Q9HB21 404 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 SRA1Q9HD15 236 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 MRPL39Q9NYK5 338 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 STMN3Q9NZ72 180 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 VSX1Q9NZR4 365 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 C7orf66A4D0T2 115 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 PRSS37A4D1T9 235 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ANKUB1A6NFN9 424 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NPIPB13A6NJU9 1138 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 FAM171A2A8MVW0 826 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NPIPB4C9JG80 1138 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 SCO2O43819 266 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 PRKNO60260 465 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 DXOO77932 396 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 GSTT2P0CG29 244 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 GSTT2BP0CG30 244 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 CRABP1P29762 137 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 GRPRP30550 384 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 MNDAP41218 407 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 CCR9P51686 369 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 NANOS3P60323 173 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 RNF4P78317 190 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 CD83Q01151 205 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 C17orf67Q0P5P2 114 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 DBPQ10586 325 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 NR0B2Q15466 257 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 SLC18B1Q6NT16 456 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 KCTD18Q6PI47 426 aaPredicted RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 ZNF227Q86WZ6 799 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 PLCZ1Q86YW0 608 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 OR6V1Q8N148 313 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 ZNF248Q8NDW4 579 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 OR5L2Q8NGL0 311 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 OTOSQ8NHW6 89 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 GRPEL2Q8TAA5 225 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 STT3BQ8TCJ2 826 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 GPR119Q8TDV5 335 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 DEDD2Q8WXF8 326 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 S100A16Q96FQ6 103 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 OR2M2Q96R28 347 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 GTPBP2Q9BX10 602 aaKnown RBP10.84□□□□□ -0.67
NUP54-202ENST00000502850 TAS2R5Q9NYW4 299 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 PTTG3PQ9NZH4 202 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
NUP54-202ENST00000502850 EXPH5Q8NEV8 1989 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 A0A1W2PPK0 400 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 CDC14CA4D256 554 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 ACOD1A6NK06 481 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 A8MV72 311 aaPredicted RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 GABARAPH6UMI1 98 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 YKT6O15498 198 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 RPP14O95059 124 aaKnown RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 HEXBP07686 556 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 GIMD1P0DJR0 217 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 ATXN8OSP0DMR3 200 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 STOMP27105 288 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 CFPP27918 469 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 EPHA8P29322 1005 aaPredicted RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 DAP3P51398 398 aaKnown RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 DLX5P56178 289 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 IFITM2Q01629 132 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 SLC36A2Q495M3 483 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 MAMSTRQ6ZN01 415 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 PRSS58Q8IYP2 241 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 PM20D2Q8IYS1 436 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 ZNF433Q8N7K0 673 aaPredicted RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 OR2G2Q8NGZ5 317 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 OR8K3Q8NH51 312 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 ZNF519Q8TB69 540 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 RGP1Q92546 391 aaPredicted RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 MAP6Q96JE9 813 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 RNF170Q96K19 258 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 ZFP3Q96NJ6 502 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 DCBLD2Q96PD2 775 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 TSSK2Q96PF2 358 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 OR8B4Q96RC9 309 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 GON7Q9BXV9 100 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 MED28Q9H204 178 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 KLHL9Q9P2J3 617 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 C19orf25Q9UFG5 118 aaPredicted RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 PPIEQ9UNP9 301 aaKnown RBP10.83□□□□□ -0.68
NUP54-202ENST00000502850 USP34Q70CQ2 3546 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 VPS13AQ96RL7 3174 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 CPAMD8Q8IZJ3 1885 aa10.83□□□□□ -0.68
NUP54-202ENST00000502850 CCDC163A0A0D9SF12 145 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 TVP23AA6NH52 213 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 ANXA2P2A6NMY6 339 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 OR4C45A6NMZ5 311 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 TTLL8A6PVC2 850 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 K7ESF4 209 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 GPR171O14626 319 aa10.82□□□□□ -0.68
NUP54-202ENST00000502850 KHNYNO15037 678 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms