RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KNG1P01042 644 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 OR8G3PP0DMU2 310 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF12P17014 697 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 CDKN2CP42773 168 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
HDAC6-236ENST00000498808 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
HDAC6-236ENST00000498808 HOXC5Q00444 222 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 RBBP4Q09028 425 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
HDAC6-236ENST00000498808 C6orf89Q6UWU4 347 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 JAZF1Q86VZ6 243 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 C1QL4Q86Z23 238 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 LRRC34Q8IZ02 419 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 KIR3DL3Q8N743 410 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 ADPRHL1Q8NDY3 354 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 SLC30A7Q8NEW0 376 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 BHLHE22Q8NFJ8 381 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF519Q8TB69 540 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 PPP1R36Q96LQ0 422 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 AKTIPQ9H8T0 292 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 SLC17A7Q9P2U7 560 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 BTNL2Q9UIR0 455 aa13.2□□□□□ -0.3
HDAC6-236ENST00000498808 POLR3KQ9Y2Y1 108 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-236ENST00000498808 GPANK1O95872 356 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 IGHMP01871 453 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 LCKP06239 509 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 SERPINB5P36952 375 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 DPY19L1Q2PZI1 675 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 RPS26P11Q5JNZ5 115 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-236ENST00000498808 C17orf107Q6ZR85 190 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 OR6N1Q8NGY5 312 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
HDAC6-236ENST00000498808 C11orf40Q8WZ69 217 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 SLC38A4Q969I6 547 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 SLC41A3Q96GZ6 507 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 SPATA9Q9BWV2 254 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-236ENST00000498808 MKS1Q9NXB0 559 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 DCAF16Q9NXF7 216 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 KLHL14Q9P2G3 628 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
HDAC6-236ENST00000498808 INSIG2Q9Y5U4 225 aa13.19□□□□□ -0.3
HDAC6-236ENST00000498808 IGHV3OR16-10A0A075B7F0 116 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 A0A087WUJ7 227 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 A0A1B0GUS0 222 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 MDFIC2A0A1B0GVS7 189 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 E9PBE3 544 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 M0QZ24 198 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 ALX3O95076 343 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 IGHV1-46P01743 117 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 IGHV3-13P01766 116 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 BCHEP06276 602 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 IGHV4-38-2P0DP08 117 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 S100A3P33764 101 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF81P51508 661 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 MVDP53602 400 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
HDAC6-236ENST00000498808 LARS2Q15031 903 aaKnown RBP13.18□□□□□ -0.3
HDAC6-236ENST00000498808 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 TMEM255AQ5JRV8 349 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 FAM209AQ5JX71 171 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 PIWIL3Q7Z3Z3 882 aaKnown RBP13.18□□□□□ -0.3
HDAC6-236ENST00000498808 SNX32Q86XE0 403 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 ICA1LQ8NDH6 482 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 APOPT1Q96IL0 206 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 TEX37Q96LM6 180 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 PANX1Q96RD7 426 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 CDH20Q9HBT6 801 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 NPHS2Q9NP85 383 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 TCF7L2Q9NQB0 619 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 P2RX2Q9UBL9 471 aa13.18□□□□□ -0.3
HDAC6-236ENST00000498808 TRAV36DV7A0A075B6V5 113 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 TM9SF1O15321 606 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SPRY3O43610 288 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SNAP29O95721 258 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 NQO1P15559 274 aaKnown RBP13.17□□□□□ -0.3
HDAC6-236ENST00000498808 RBMXP38159 391 aaKnown RBP13.17□□□□□ -0.3
HDAC6-236ENST00000498808 MTNR1AP48039 350 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 UCP2P55851 309 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 KRTAP10-3P60369 221 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SLC3A1Q07837 685 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 PMS2P3Q13401 168 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SPRNQ5BIV9 151 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 ZNF621Q6ZSS3 439 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 NET1Q7Z628 596 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-236ENST00000498808 MIER2Q8N344 545 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SLC22A24Q8N4F4 322 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 ZIM3Q96PE6 472 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 SH3GL3Q99963 347 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
HDAC6-236ENST00000498808 MRI1Q9BV20 369 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 BCL2L14Q9BZR8 327 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 C12orf10Q9HB07 376 aa13.17□□□□□ -0.3
HDAC6-236ENST00000498808 BEX1Q9HBH7 125 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms