RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 RRM2P31350 389 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 HNRNPH3P31942 346 aaKnown RBP2.72□□□□□ -1.97
SMC4-225ENST00000497203 CDH6P55285 790 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 GPX6P59796 221 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 ZBED5Q49AG3 693 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 PRAMEF20Q5VT98 475 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 PUSL1Q8N0Z8 303 aaKnown RBP2.72□□□□□ -1.97
SMC4-225ENST00000497203 LIX1Q8N485 282 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 ZADH2Q8N4Q0 377 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 Q8N7P7 452 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 NPBQ8NG41 125 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 ACER1Q8TDN7 264 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 SDR42E1Q8WUS8 393 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 RDH5Q92781 318 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 MCUR1Q96AQ8 359 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 FAM210BQ96KR6 192 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 CHP1Q99653 195 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 RARRES2Q99969 163 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 OSBPL10Q9BXB5 764 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 NXF3Q9H4D5 531 aaKnown RBP2.72□□□□□ -1.97
SMC4-225ENST00000497203 CLMPQ9H6B4 373 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 NEK6Q9HC98 313 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 INPP5EQ9NRR6 644 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 MSH6P52701 1360 aa2.72□□□□□ -1.97
SMC4-225ENST00000497203 A0A075B6Q4 140 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 TRBV11-1A0A0K0K1C0 115 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 WI2-2373I1.2A0A1W2PRP0 233 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 NKX2-6A6NCS4 301 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 TCP11X1B4DZS4 312 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 PPP1R2P9O14990 202 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 TRAF3IP2O43734 574 aaPredicted RBP2.71□□□□□ -1.98
SMC4-225ENST00000497203 SMIM10L1P0DMW3 83 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 OTX1P32242 354 aaPredicted RBP2.71□□□□□ -1.98
SMC4-225ENST00000497203 BTCP35070 178 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SSR4P51571 173 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 CCNHP51946 323 aaPredicted RBP2.71□□□□□ -1.98
SMC4-225ENST00000497203 YWHAGP61981 247 aaKnown RBP eCLIP2.71□□□□□ -1.98
SMC4-225ENST00000497203 ZNF92Q03936 586 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 AQP6Q13520 282 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SPANXN2Q5MJ10 180 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 LRRC66Q68CR7 880 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SLC8B1Q6J4K2 584 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 LCN12Q6JVE5 192 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 CERS6Q6ZMG9 384 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 NIPA1Q7RTP0 329 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 C6orf120Q7Z4R8 191 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 PDIK1LQ8N165 341 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 EID2Q8N6I1 236 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SLC22A8Q8TCC7 542 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 DTX3LQ8TDB6 740 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 CXorf40AQ8TE69 158 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 RNF138Q8WVD3 245 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 ELMO1Q92556 727 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SGK3Q96BR1 496 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 CCDC126Q96EE4 140 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 MED8Q96G25 268 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SMIM10Q96HG1 83 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SAMSN1Q9NSI8 373 aaKnown RBP2.71□□□□□ -1.98
SMC4-225ENST00000497203 ZNF226Q9NYT6 803 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 SLC25A37Q9NYZ2 338 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 CACNG2Q9Y698 323 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 NSD2O96028 1365 aa2.71□□□□□ -1.98
SMC4-225ENST00000497203 TRAV39A0A0B4J263 110 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 KIR2DL5BA0A0G2JN68 375 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 KIR2DL5BA0A0G2JPC4 375 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 LRRIQ3A6PVS8 624 aaPredicted RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 CDC7O00311 574 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 AIM2O14862 343 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 LSM1O15116 133 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 CLOCKO15516 846 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 EEDO75530 441 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 MOSP00540 346 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 FGGP02679 453 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 FTH1P02794 183 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 PABPC4LP0CB38 370 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 MGMTP16455 207 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 EIF2S2P20042 333 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 NAA10P41227 235 aaPredicted RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 SYKP43405 635 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 CCR8P51685 355 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 RGS8P57771 180 aaPredicted RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 CCNA1P78396 465 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 TGM3Q08188 693 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 SMARCB1Q12824 385 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 UNC119Q13432 240 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 FZD2Q14332 565 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 PRPSAP1Q14558 356 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 SGCAQ16586 387 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 C9orf135Q5VTT2 229 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 SASS6Q6UVJ0 657 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 ZNF429Q86V71 674 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 THOC6Q86W42 341 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 KRTAP11-1Q8IUC1 163 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 MKXQ8IYA7 352 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 KIR2DL5AQ8N109 375 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 GTPBP8Q8N3Z3 284 aaPredicted RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 MS4A15Q8N5U1 240 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 KIR2DL5BQ8NHK3 375 aa2.7□□□□□ -1.98
SMC4-225ENST00000497203 GEMIN6Q8WXD5 167 aaKnown RBP2.7□□□□□ -1.98
SMC4-225ENST00000497203 TGS1Q96RS0 853 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms