RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 KCNK17Q96T54 332 aa16.2■□□□□ 0.18
RGP1-202ENST00000496906 MRPL13Q9BYD1 178 aaKnown RBP16.2■□□□□ 0.18
RGP1-202ENST00000496906 ZNF226Q9NYT6 803 aa16.2■□□□□ 0.18
RGP1-202ENST00000496906 OSGIN2Q9Y236 505 aa16.2■□□□□ 0.18
RGP1-202ENST00000496906 RNF6Q9Y252 685 aa16.2■□□□□ 0.18
RGP1-202ENST00000496906 NBASA2RRP1 2371 aa16.2■□□□□ 0.18
RGP1-202ENST00000496906 DOCK7Q96N67 2140 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 PRSS37A4D1T9 235 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 CENPBD1B2RD01 187 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 E9PLN8 166 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 H7C1C5 153 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 TLX2O43763 284 aaPredicted RBP16.19■□□□□ 0.18
RGP1-202ENST00000496906 MRPL33O75394 65 aaKnown RBP16.19■□□□□ 0.18
RGP1-202ENST00000496906 IL2RAP01589 272 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 STSP08842 583 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 CEACAM8P31997 349 aaPredicted RBP16.19■□□□□ 0.18
RGP1-202ENST00000496906 PER3P56645 1201 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 LCN6P62502 163 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 LEG1Q6P5S2 330 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 FAM214BQ7L5A3 538 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 NUFIP2Q7Z417 695 aaKnown RBP16.19■□□□□ 0.18
RGP1-202ENST00000496906 C8orf59Q8N0T1 100 aaPredicted RBP16.19■□□□□ 0.18
RGP1-202ENST00000496906 CYB561A3Q8NBI2 242 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 NAXEQ8NCW5 288 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 GALNT11Q8NCW6 608 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 TMEM163Q8TC26 289 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 ZNF566Q969W8 418 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 IL4I1Q96RQ9 567 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 VKORC1Q9BQB6 163 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 ALG12Q9BV10 488 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 FN3KQ9H479 309 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 Q9H521 79 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 PARPBPQ9NWS1 579 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 VSX1Q9NZR4 365 aaPredicted RBP16.19■□□□□ 0.18
RGP1-202ENST00000496906 LRRC42Q9Y546 428 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 HSPE1-MOB4S4R3N1 261 aa16.19■□□□□ 0.18
RGP1-202ENST00000496906 OR6C68A6NDL8 312 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 CRHP06850 196 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 GABRB1P18505 474 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 MYF6P23409 242 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 KIR2DL2P43627 348 aaPredicted RBP16.18■□□□□ 0.18
RGP1-202ENST00000496906 ISL1P61371 349 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 SNRPGP62308 76 aaKnown RBP16.18■□□□□ 0.18
RGP1-202ENST00000496906 IL5RAQ01344 420 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 FOXF2Q12947 444 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 ITGADQ13349 1161 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 EIF2S3LQ2VIR3 472 aaKnown RBP16.18■□□□□ 0.18
RGP1-202ENST00000496906 CARD17Q5XLA6 110 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 RHOXF1Q8NHV9 184 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 DMRTA2Q96SC8 542 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 HINT3Q9NQE9 182 aaKnown RBP16.18■□□□□ 0.18
RGP1-202ENST00000496906 FOXD3Q9UJU5 478 aaPredicted RBP16.18■□□□□ 0.18
RGP1-202ENST00000496906 EMC9Q9Y3B6 208 aa16.18■□□□□ 0.18
RGP1-202ENST00000496906 ARHGAP21Q5T5U3 1957 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 SLC22A23A1A5C7 686 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 FAM183AA6NL82 134 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 DENRO43583 198 aaKnown RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 MPZL2O60487 215 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 SLC43A1O75387 559 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 TNFSF13O75888 250 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 TMIGD3P0DMS9 266 aaPredicted RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 EDNRAP25101 427 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 CLRN1P58418 232 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 PMPCAQ10713 525 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 MAD2L1BPQ15013 274 aaPredicted RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 HIST3H3Q16695 136 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 RIPPLY2Q5TAB7 128 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 THAP5Q7Z6K1 395 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 SYT14Q8NB59 555 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 TMEM54Q969K7 222 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 NMD3Q96D46 503 aaKnown RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 HCAR1Q9BXC0 346 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 SYT4Q9H2B2 425 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 RASSF1Q9NS23 344 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 MEMO1Q9Y316 297 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 AHCYL1O43865 530 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 RENP00797 406 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 CSNK1A1P48729 337 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 SIRPAP78324 504 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 CD47Q08722 323 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 IGFBP7Q16270 282 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 PLBD1Q6P4A8 553 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 CXXC5Q7LFL8 322 aaKnown RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 CPOQ8IVL8 374 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 C20orf196Q8IYI0 205 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 FAM26EQ8N5C1 309 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 CNEP1R1Q8N9A8 125 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 OR6K3Q8NGY3 331 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 FBLIM1Q8WUP2 373 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 APH1BQ8WW43 257 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 PTP4A1Q93096 173 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 APH1AQ96BI3 265 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 LRR1Q96L50 414 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 CNBD2Q96M20 576 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 NMNAT2Q9BZQ4 307 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 RPRD1BQ9NQG5 326 aaKnown RBP16.17■□□□□ 0.18
RGP1-202ENST00000496906 AASSQ9UDR5 926 aa16.17■□□□□ 0.18
RGP1-202ENST00000496906 PRR23D1E9PI22 279 aaPredicted RBP16.16■□□□□ 0.18
RGP1-202ENST00000496906 PRR23D2P0DMB1 279 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms