RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CACNG2Q9Y698 323 aa11.78□□□□□ -0.52
GARNL3-220ENST00000496711 TRBV5-5A0A0J9YX44 114 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 VSTM2BA6NLU5 285 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 IFITM5A6NNB3 132 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 AIPO00170 330 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 PLPP3O14495 311 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 YKT6O15498 198 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 GPANK1O95872 356 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 ONECUT2O95948 504 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 SLC6A1P30531 599 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 BLVRAP53004 296 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 Q7L0L9 218 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 WDR5BQ86VZ2 330 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 OR6S1Q8NH40 331 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 OTOSQ8NHW6 89 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 ADAMTS14Q8WXS8 1223 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 NSMAFQ92636 917 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 WDR77Q9BQA1 342 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-220ENST00000496711 OR2B2Q9GZK3 357 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 COMMD4Q9H0A8 199 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 SLITRK2Q9H156 845 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 ABCG5Q9H222 651 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 RABL2AQ9UBK7 228 aaPredicted RBP11.77□□□□□ -0.53
GARNL3-220ENST00000496711 RABL2BQ9UNT1 228 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 PCDHGA9Q9Y5G4 932 aaKnown RBP11.77□□□□□ -0.53
GARNL3-220ENST00000496711 N6AMT1Q9Y5N5 214 aa11.77□□□□□ -0.53
GARNL3-220ENST00000496711 A0A087WV48 116 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 FTCDNL1E5RQL4 147 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF254O75437 659 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF432O94892 652 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 HLA-DQA2P01906 255 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 NAGAP17050 411 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 RPS27P42677 84 aaKnown RBP11.76□□□□□ -0.53
GARNL3-220ENST00000496711 MMP15P51511 669 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 INSM1Q01101 510 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-220ENST00000496711 HES5Q5TA89 166 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 OR5M10Q6IEU7 315 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 CPEB2Q7Z5Q1 589 aaKnown RBP11.76□□□□□ -0.53
GARNL3-220ENST00000496711 PPP1R3BQ86XI6 285 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF433Q8N7K0 673 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-220ENST00000496711 OR5L2Q8NGL0 311 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 OR2G2Q8NGZ5 317 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 OR8K3Q8NH51 312 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 PIGKQ92643 395 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 SPSB2Q99619 263 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 KCNG2Q9UJ96 466 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 CAMK2AQ9UQM7 478 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 V9GY05 133 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 IGLV1-36A0A0B4J1U3 117 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 TMEM212A6NML5 194 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 OR4C45A6NMZ5 311 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 MAGEB1P43366 347 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 DLX5P56178 289 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 RASGEF1BQ0VAM2 473 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 LRRC69Q6ZNQ3 347 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 ESPNLQ6ZVH7 1005 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 EID2Q8N6I1 236 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 RNF138Q8WVD3 245 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 ASB17Q8WXJ9 295 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 YIPF5Q969M3 257 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 DMRTB1Q96MA1 342 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 OR8B4Q96RC9 309 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 AMELYQ99218 206 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 CRB3Q9BUF7 120 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 MRI1Q9BV20 369 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 GALNT9Q9HCQ5 603 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 ANKRD10Q9NXR5 420 aa11.76□□□□□ -0.53
GARNL3-220ENST00000496711 C19orf25Q9UFG5 118 aaPredicted RBP11.76□□□□□ -0.53
GARNL3-220ENST00000496711 SLC22A23A1A5C7 686 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 C2orf72A6NCS6 295 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 TMEM200CA6NKL6 621 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 CENPXA8MT69 81 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 INMT-MINDY4F8WBC2 141 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 CTDSPLO15194 276 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 SLC16A7O60669 478 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 BTCP35070 178 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 APOBEC1P41238 236 aaKnown RBP11.75□□□□□ -0.53
GARNL3-220ENST00000496711 SOX2P48431 317 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 AGFG1P52594 562 aaKnown RBP11.75□□□□□ -0.53
GARNL3-220ENST00000496711 DGCR2P98153 550 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 MELKQ14680 651 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 MFSD13AQ14CX5 517 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 SLC36A2Q495M3 483 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 PLA1AQ53H76 456 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 BICRALQ6AI39 1079 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 FAM199XQ6PEV8 388 aaPredicted RBP11.75□□□□□ -0.53
GARNL3-220ENST00000496711 STAC2Q6ZMT1 411 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 KRT74Q7RTS7 529 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 TOMM5Q8N4H5 51 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 ZNF676Q8N7Q3 588 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 CAPSLQ8WWF8 208 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 TTC9Q92623 222 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 PMEPA1Q969W9 287 aa11.75□□□□□ -0.53
GARNL3-220ENST00000496711 ZFP3Q96NJ6 502 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms