RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PIK3C3Q8NEB9 887 aa12.54□□□□□ -0.4
CXCL12-208ENST00000496375 MEPEQ9NQ76 525 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-208ENST00000496375 MRPL39Q9NYK5 338 aaKnown RBP12.54□□□□□ -0.4
CXCL12-208ENST00000496375 NDUFAF4Q9P032 175 aa12.54□□□□□ -0.4
CXCL12-208ENST00000496375 PMF1-BGLAPU3KQ54 211 aa12.54□□□□□ -0.4
CXCL12-208ENST00000496375 IGHV1-18A0A0C4DH31 117 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 GYG2O15488 501 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 LY6HO94772 140 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 MT-ND1P03886 318 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 TSPAN19P0C672 248 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 RHCEP18577 417 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 GRPRP30550 384 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 IFNA8P32881 189 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 MAGEA2P43356 314 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 SELENOPP49908 381 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 RASSF2P50749 326 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 VLDLRP98155 873 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 MS4A2Q01362 244 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 TRAP1Q12931 704 aaKnown RBP12.53□□□□□ -0.4
CXCL12-208ENST00000496375 ZNF74Q16587 644 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 NIPAL3Q6P499 406 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 NHLRC1Q6VVB1 395 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 CREB3L2Q70SY1 520 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 PIWIL3Q7Z3Z3 882 aaKnown RBP12.53□□□□□ -0.4
CXCL12-208ENST00000496375 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 C10orf105Q8TEF2 133 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 TMEM239Q8WW34 195 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
CXCL12-208ENST00000496375 FBXO17Q96EF6 278 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 BOD1Q96IK1 185 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 MOGAT1Q96PD6 335 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-208ENST00000496375 REPIN1Q9BWE0 567 aaKnown RBP12.53□□□□□ -0.4
CXCL12-208ENST00000496375 MAGIXQ9H6Y5 334 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 STAB1Q9NY15 2570 aa12.53□□□□□ -0.4
CXCL12-208ENST00000496375 A0A1W2PRQ8 180 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ANKRD65E5RJM6 399 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ZNF587BE7ETH6 402 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 H0YHG0 523 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 J3KTA2 159 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 M0R082 166 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-208ENST00000496375 PDE5AO76074 875 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 F12P00748 615 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-208ENST00000496375 CSF3P09919 207 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ASAH2BP0C7U1 165 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ITGA2P17301 1181 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 UGT2B15P54855 530 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 DGCR6Q14129 220 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 TRAM2Q15035 370 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 MST1LQ2TV78 715 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 H1FNTQ75WM6 255 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-208ENST00000496375 LINGO2Q7L985 606 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 SLC46A3Q7Z3Q1 461 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 CYP4Z1Q86W10 505 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 DHFR2Q86XF0 187 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 EPHX4Q8IUS5 362 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ZNF417Q8TAU3 575 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 RNF217Q8TC41 542 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 TMEM255BQ8WV15 326 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 CLPTM1LQ96KA5 538 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 SLC38A2Q96QD8 506 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ZNF587Q96SQ5 575 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-208ENST00000496375 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 FUZQ9BT04 418 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 THTPAQ9BU02 230 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 IL1RAPQ9NPH3 570 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 SEC14L4Q9UDX3 406 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 ZNF229Q9UJW7 825 aa12.52□□□□□ -0.41
CXCL12-208ENST00000496375 OR6C65A6NJZ3 312 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 GSC2O15499 205 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 UPK3AO75631 287 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 FUT4P22083 530 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 GTF2E2P29084 291 aaKnown RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 SNRPD2P62316 118 aaKnown RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 TUBA1BP68363 451 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 TUBA4AP68366 448 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 ZP4Q12836 540 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 TUBA1AQ71U36 451 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 RNF113BQ8IZP6 322 aaKnown RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 KDM8Q8N371 416 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 OR5J2Q8NH18 312 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 ACOT11Q8WXI4 607 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 OXGR1Q96P68 337 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 FNDC11Q9BVV2 318 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 ASPNQ9BXN1 380 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 CADM1Q9BY67 442 aaKnown RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 LRMDAQ9H2I8 198 aa12.51□□□□□ -0.41
CXCL12-208ENST00000496375 MMADHCQ9H3L0 296 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 NMNAT1Q9HAN9 279 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-208ENST00000496375 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms