RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FBXO17Q96EF6 278 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 PLK3Q9H4B4 646 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 MYOZ1Q9NP98 299 aaPredicted RBP13.64□□□□□ -0.23
HDAC4-213ENST00000496347 B3GNT2Q9NY97 397 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 STX18Q9P2W9 335 aaKnown RBP13.64□□□□□ -0.23
HDAC4-213ENST00000496347 RIMS3Q9UJD0 308 aa13.64□□□□□ -0.23
HDAC4-213ENST00000496347 IGHV4-30-2A0A087WSY4 118 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 A0A096LNT2 108 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 NPIPB13A6NJU9 1138 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 NPIPB4C9JG80 1138 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 OR7A10O76100 309 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 HLA-HP01893 362 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 TP53P04637 393 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-213ENST00000496347 OR4A8P0C604 315 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PGA4P0DJD7 388 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PGA3P0DJD8 388 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 COX4I1P13073 169 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PCSK6P29122 969 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 IFNA8P32881 189 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 OR1E2P47887 323 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PPOXP50336 477 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 UGT2B15P54855 530 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 SELENOWP63302 87 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 RPL18Q07020 188 aaKnown RBP13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PIN1Q13526 163 aaPredicted RBP13.63□□□□□ -0.23
HDAC4-213ENST00000496347 MST1LQ2TV78 715 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 NRN1LQ496H8 165 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 HACD2Q6Y1H2 254 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PIWIL3Q7Z3Z3 882 aaKnown RBP13.63□□□□□ -0.23
HDAC4-213ENST00000496347 DPPA2Q7Z7J5 298 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 NOXO1Q8NFA2 376 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 PFN4Q8NHR9 129 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 GEMIN6Q8WXD5 167 aaKnown RBP13.63□□□□□ -0.23
HDAC4-213ENST00000496347 FAM168AQ92567 244 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 SGTBQ96EQ0 304 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 TPD52L3Q96J77 140 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 SEPHS2Q99611 448 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 NOX3Q9HBY0 568 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 CMTM6Q9NX76 183 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 MED31Q9Y3C7 131 aa13.63□□□□□ -0.23
HDAC4-213ENST00000496347 ANK3Q12955 4377 aaKnown RBP13.62□□□□□ -0.23
HDAC4-213ENST00000496347 VSTM5A8MXK1 200 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 INAFM1C9JVW0 142 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 MCIDASD6RGH6 385 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 TLX2O43763 284 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-213ENST00000496347 CD5LO43866 347 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 RAB36O95755 333 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 BCL10O95999 233 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 IFNW1P05000 195 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 CD79AP11912 226 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF14P17017 642 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-213ENST00000496347 SLC7A2P52569 658 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 HGFACQ04756 655 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 LIPEQ05469 1076 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 ST3GAL3Q11203 375 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 SNTB2Q13425 540 aaKnown RBP13.62□□□□□ -0.23
HDAC4-213ENST00000496347 MELKQ14680 651 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 C8orf82Q6P1X6 216 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-213ENST00000496347 VHLLQ6RSH7 139 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 SPATA21Q7Z572 469 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 NKAIN4Q8IVV8 208 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 OFCC1Q8IZS5 231 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 MAPK1IP1LQ8NDC0 245 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 HTRA1Q92743 480 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 HOPXQ9BPY8 73 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-213ENST00000496347 C20orf141Q9NUB4 165 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 TMEM38BQ9NVV0 291 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 ZNF224Q9NZL3 707 aa13.62□□□□□ -0.23
HDAC4-213ENST00000496347 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 NDUFS8O00217 210 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 SHOX2O60902 331 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 FARS2O95363 451 aaKnown RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 F12P00748 615 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 ERCC1P07992 297 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 TSPAN19P0C672 248 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 OR8G3PP0DMU2 310 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 NR2C1P13056 603 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 NPR2P20594 1047 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 PTDSS1P48651 473 aaKnown RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 NUDT2P50583 147 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 LOXL1Q08397 574 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 HIST3H3Q16695 136 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 C10orf105Q8TEF2 133 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 ASB10Q8WXI3 467 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 CMTM5Q96DZ9 223 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 SORCS2Q96PQ0 1159 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 EFCAB1Q9HAE3 211 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 INIPQ9NRY2 104 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 ABCD2Q9UBJ2 740 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 A4GNTQ9UNA3 340 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 SPEF1Q9Y4P9 236 aa13.61□□□□□ -0.23
HDAC4-213ENST00000496347 YLPM1P49750 1951 aaKnown RBP13.61□□□□□ -0.23
HDAC4-213ENST00000496347 GMNCA6NCL1 334 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 hCG_2039718K7EN88 272 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 CXCR6O00574 342 aa13.6□□□□□ -0.23
HDAC4-213ENST00000496347 NME4O00746 187 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms