RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 WDFY1Q8IWB7 410 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ANKS4BQ8N8V4 417 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF540Q8NDQ6 660 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 NEU4Q8WWR8 484 aaPredicted RBP11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF566Q969W8 418 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 SLC25A44Q96H78 314 aaPredicted RBP11.03□□□□□ -0.64
PTPRF-214ENST00000496043 FOXN4Q96NZ1 517 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 PRSS27Q9BQR3 290 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 PIMREGQ9BSJ6 248 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ZNF426Q9BUY5 554 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 POLR2J2Q9GZM3 115 aaKnown RBP11.03□□□□□ -0.64
PTPRF-214ENST00000496043 POLR2J3Q9H1A7 115 aaKnown RBP11.03□□□□□ -0.64
PTPRF-214ENST00000496043 RIMS3Q9UJD0 308 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 FBXL3Q9UKT7 428 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 CMAHPQ9Y471 501 aa11.03□□□□□ -0.64
PTPRF-214ENST00000496043 ZANQ9Y493 2812 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 SH3PXD2BA1X283 911 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 VWC2LB2RUY7 222 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 UBL3O95164 117 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 RAB36O95755 333 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 MT-ND1P03886 318 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 B4GALT1P15291 398 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF14P17017 642 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-214ENST00000496043 KDELR2P33947 212 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 RBM34P42696 430 aaKnown RBP11.02□□□□□ -0.65
PTPRF-214ENST00000496043 NR4A2P43354 598 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 GIPRP48546 466 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 PTDSS1P48651 473 aaKnown RBP11.02□□□□□ -0.65
PTPRF-214ENST00000496043 CRYBA2P53672 197 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 TAS2R41P59536 307 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 CHRFAM7AQ494W8 412 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 IQCCQ4KMZ1 466 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 C6orf52Q5T4I8 152 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 KRT80Q6KB66 452 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 LRFN4Q6PJG9 635 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 DEF8Q6ZN54 512 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 NANOGNBQ7Z5D8 188 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 NKAIN4Q8IVV8 208 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 SVOPLQ8N434 492 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF75AQ96N20 296 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 MDFIQ99750 246 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 NOX3Q9HBY0 568 aa11.02□□□□□ -0.65
PTPRF-214ENST00000496043 MEPEQ9NQ76 525 aaPredicted RBP11.02□□□□□ -0.65
PTPRF-214ENST00000496043 A0A1W2PRG6 482 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 FXYD1O00168 92 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 SLC22A2O15244 555 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 DHHO43323 396 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 OR7A10O76100 309 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 OR5F1O95221 314 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 FARS2O95363 451 aaKnown RBP11.01□□□□□ -0.65
PTPRF-214ENST00000496043 IGF2P01344 180 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 QDPRP09417 244 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 OR8G3PP0DMU2 310 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 IGHV4-31P0DP07 118 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 THRBP10828 461 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 ZNF35P13682 527 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 TNFRSF1BP20333 461 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 IFNA8P32881 189 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 LSP1P33241 339 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 EVX1P49640 407 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 GZMKP49863 264 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 GALK2Q01415 458 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
PTPRF-214ENST00000496043 PIN1Q13526 163 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-214ENST00000496043 GGTLC2Q14390 218 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 MELKQ14680 651 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 GKAP1Q5VSY0 366 aaPredicted RBP11.01□□□□□ -0.65
PTPRF-214ENST00000496043 CGB2Q6NT52 195 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 PODNL1Q6PEZ8 512 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 SKA3Q8IX90 412 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 SLC22A24Q8N4F4 322 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 TMEM239Q8WW34 195 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 SGTBQ96EQ0 304 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 RNF121Q9H920 327 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 DYNLRB1Q9NP97 96 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 TMEM160Q9NX00 188 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 AP3M1Q9Y2T2 418 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 CAPN7Q9Y6W3 813 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 CR1P17927 2039 aa11.01□□□□□ -0.65
PTPRF-214ENST00000496043 ELOVL7A1L3X0 281 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 FAM220BPB1ANY3 271 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 MGRN1O60291 552 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 SHOX2O60902 331 aaPredicted RBP11□□□□□ -0.65
PTPRF-214ENST00000496043 STAMBPO95630 424 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 IGHG1P01857 330 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 SERPINA5P05154 406 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 F13BP05160 661 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 ADRA2AP08913 450 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 DAOP14920 347 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 GLRXP35754 106 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 OR1E2P47887 323 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 CLRN1P58418 232 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 SELENOWP63302 87 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 GUCY1A3Q02108 690 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 RAB39AQ14964 217 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 CYBRD1Q53TN4 286 aa11□□□□□ -0.65
PTPRF-214ENST00000496043 TMEM53Q6P2H8 277 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms