RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 PAQR6Q6TCH4 344 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 Q6ZTK2 550 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 LRP11Q86VZ4 500 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 LYSMD2Q8IV50 215 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 C10orf53Q8N6V4 93 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 OR4F6Q8NGB9 312 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 RHEBL1Q8TAI7 183 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 GRK7Q8WTQ7 553 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 DYRK2Q92630 601 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 CDKL2Q92772 493 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF524Q96C55 264 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 MARS2Q96GW9 593 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 MS4A4EQ96PG1 132 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 CITED2Q99967 270 aaPredicted RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 EBPLQ9BY08 206 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 IQCGQ9H095 443 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 MUC13Q9H3R2 512 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 NDUFAF4Q9P032 175 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 OR5V1Q9UGF6 321 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 CHRNA9Q9UGM1 479 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 SCOCQ9UIL1 159 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 TEX264Q9Y6I9 313 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 CAPN7Q9Y6W3 813 aa8.1□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRAPPC2LH3BP13 241 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 K7EIL1 84 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 ANKRD28O15084 1053 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 NPHS1O60500 1241 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 EIF4E2O60573 245 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 PIAS1O75925 651 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 PPIAL4GP0DN37 164 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 BCKDHAP12694 445 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 SLC35A1P78382 337 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 H3F3AP84243 136 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 SLC3A1Q07837 685 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 IFFO1Q0D2I5 559 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 C2orf80Q0P641 193 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 DBPQ10586 325 aaPredicted RBP8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 SLC17A1Q14916 467 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 KLHL26Q53HC5 615 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 XP32Q5T750 250 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 Q6YL49 198 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 CMC1Q7Z7K0 106 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 MDP1Q86V88 176 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 Q8N1Y9 231 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 ELMOD3Q96FG2 381 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 OTUB1Q96FW1 271 aaPredicted RBP8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 FAM71F1Q96KD3 344 aaPredicted RBP8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 CPNE1Q99829 537 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 RHOXF2Q9BQY4 288 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 THUMPD3Q9BV44 507 aaKnown RBP8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 BTBD2Q9BX70 525 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 LAT2Q9GZY6 243 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 NELFAQ9H3P2 528 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 SAP30LQ9HAJ7 183 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 GRHL1Q9NZI5 618 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 TMEM181Q9P2C4 612 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 LYSTQ99698 3801 aa8.09□□□□□ -1.11
SMARCAL1-213ENST00000496037 NOTCH3Q9UM47 2321 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 DSPPQ9NZW4 1301 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 H0YL77 283 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 GPR137BO60478 399 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 ZNF432O94892 652 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 OTCP00480 354 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 IGLV1-40P01703 118 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 MELTFP08582 738 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 ANXA4P09525 319 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 FKBP2P26885 142 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 CRABP2P29373 138 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 APOBEC1P41238 236 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 GNGT1P63211 74 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 RAE1P78406 368 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 ZNF763Q0D2J5 394 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 BST1Q10588 318 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 MRPL28Q13084 256 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 RAB32Q13637 225 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 FAM83EQ2M2I3 478 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 CDC73Q6P1J9 531 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 BTNL3Q6UXE8 466 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 BRD3OSQ6XYD6 125 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 ZNF551Q7Z340 670 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 GPAT4Q86UL3 456 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 C1orf174Q8IYL3 243 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 SPICQ8N5J4 248 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 PTGR2Q8N8N7 351 aaPredicted RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 FBXO36Q8NEA4 188 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 OR9K2Q8NGE7 335 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 OR10S1Q8NGN2 331 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 BCAS4Q8TDM0 211 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 SSMEM1Q8WWF3 244 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 CCL17Q92583 94 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 UPRTQ96BW1 309 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 FAM210AQ96ND0 272 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 ZNF385AQ96PM9 386 aaKnown RBP8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 DIRC2Q96SL1 478 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 OR11A1Q9GZK7 315 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 NMUR2Q9GZQ4 415 aa8.08□□□□□ -1.12
SMARCAL1-213ENST00000496037 BATF3Q9NR55 127 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms