RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ATP5HO75947 161 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 GOSR1O95249 250 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 WNT11O96014 354 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 IGHG1P01857 330 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 QDPRP09417 244 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 TSPAN19P0C672 248 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 B4GALT1P15291 398 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ACADSP16219 412 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ACVR1BP36896 505 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 OMPP47874 163 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 DAP3P51398 398 aaKnown RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 SH3BGRP55822 239 aaPredicted RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 PRPS1P60891 318 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 RPL27P61353 136 aaKnown RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 ERVK-25P63136 954 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 CD47Q08722 323 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 FHL1Q13642 323 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 NCMAPQ5T1S8 102 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ADAM5Q6NVV9 412 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ANKRD16Q6P6B7 361 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 LRFN4Q6PJG9 635 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 KLHL17Q6TDP4 642 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 SEZ6L2Q6UXD5 910 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ZNF813Q6ZN06 617 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 TMPRSS11FQ6ZWK6 438 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ADGRG5Q8IZF4 528 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 CANT1Q8WVQ1 401 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ASB10Q8WXI3 467 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 HTRA1Q92743 480 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 NEUROG1Q92886 237 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 TMEM54Q969K7 222 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 RSRC1Q96IZ7 334 aaKnown RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 LRR1Q96L50 414 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ADAD1Q96M93 576 aaKnown RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 GPA33Q99795 319 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 FUZQ9BT04 418 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 TXNIPQ9H3M7 391 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 MAGIXQ9H6Y5 334 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 KRCC1Q9NPI7 259 aaPredicted RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 VNN3Q9NY84 501 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 GLTPQ9NZD2 209 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ZNF346Q9UL40 294 aaKnown RBP8.6□□□□□ -1.03
CALD1-223ENST00000496024 AMDHD2Q9Y303 409 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 ADAM18Q9Y3Q7 739 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 RNF115Q9Y4L5 304 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 U3KQV3 271 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 RTTNQ86VV8 2226 aa8.6□□□□□ -1.03
CALD1-223ENST00000496024 AQP12BA6NM10 295 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 ZNF99A8MXY4 864 aaPredicted RBP8.59□□□□□ -1.03
CALD1-223ENST00000496024 ABCD4O14678 606 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 KRT36O76013 467 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 SLC2A10O95528 541 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 PGA4P0DJD7 388 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 PGA3P0DJD8 388 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 RAP2AP10114 183 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 CD79AP11912 226 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 ZNF26P17031 533 aaPredicted RBP8.59□□□□□ -1.03
CALD1-223ENST00000496024 DNASE1P24855 282 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 MAGEA2P43356 314 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 LIMS1P48059 325 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 RPS4XP62701 263 aaKnown RBP8.59□□□□□ -1.03
CALD1-223ENST00000496024 SPOCK1Q08629 439 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 KEAP1Q14145 624 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 ARMC4Q5T2S8 1044 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 OR2T5Q6IEZ7 315 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 CCDC121Q6ZUS5 278 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 HDDC2Q7Z4H3 204 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 ZER1Q7Z7L7 766 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 AQP12AQ8IXF9 295 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 C17orf78Q8N4C9 275 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 LRRC75AQ8NAA5 344 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 NOXO1Q8NFA2 376 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 KBTBD8Q8NFY9 601 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 OR9Q2Q8NGE9 314 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 OR2T29Q8NH02 315 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 AKAP1Q92667 903 aaKnown RBP eCLIP8.59□□□□□ -1.03
CALD1-223ENST00000496024 HDAC2Q92769 488 aaKnown RBP8.59□□□□□ -1.03
CALD1-223ENST00000496024 MCHR2Q969V1 340 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 TSPAN32Q96QS1 320 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 KATNB1Q9BVA0 655 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 CHID1Q9BWS9 393 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 NELFAQ9H3P2 528 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 REEP1Q9H902 201 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 CCM2LQ9NUG4 571 aaPredicted RBP8.59□□□□□ -1.03
CALD1-223ENST00000496024 SLC7A8Q9UHI5 535 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 ST6GALNAC2Q9UJ37 374 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 LYVE1Q9Y5Y7 322 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 USF3Q68DE3 2245 aa8.59□□□□□ -1.03
CALD1-223ENST00000496024 PRRC2AP48634 2157 aaKnown RBP8.58□□□□□ -1.04
CALD1-223ENST00000496024 H7C1C5 153 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 GNGT2O14610 69 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 ARHGEF9O43307 516 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 DHHO43323 396 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 PTP4A3O75365 173 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 CCNB2O95067 398 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 NDUFB2O95178 105 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 CST1P01037 141 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 HLA-HP01893 362 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 CD14P08571 375 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms