RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 OR5M1Q8NGP8 315 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 OR2G2Q8NGZ5 317 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 RAB40AQ8WXH6 277 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PPP1R14AQ96A00 147 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 LCORQ96JN0 433 aaPredicted RBP11.82□□□□□ -0.52
PTPN7-217ENST00000495688 MAP3K3Q99759 626 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 SLITRK2Q9H156 845 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 TAS2R5Q9NYW4 299 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 GRHPRQ9UBQ7 328 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 PCDH15Q96QU1 1955 aa11.82□□□□□ -0.52
PTPN7-217ENST00000495688 NAP1L6A6NFF2 107 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 OR4C45A6NMZ5 311 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 POM121CA8CG34 1229 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 A8MUA0 341 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 B8ZZF3 427 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 CREBL2O60519 120 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-217ENST00000495688 KDM4BO94953 1096 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 NDUFB6O95139 128 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 ASAH2BP0C7U1 165 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 IFNGR1P15260 489 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 MAZP56270 477 aaKnown RBP11.81□□□□□ -0.52
PTPN7-217ENST00000495688 YPEL5P62699 121 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 FUT7Q11130 342 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 MFSD13AQ14CX5 517 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 ISXQ2M1V0 245 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 CDC20BQ86Y33 519 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 RADILQ96JH8 1075 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 EMC3Q9P0I2 261 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 TRBV5-5A0A0J9YX44 114 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 FAM221BA6H8Z2 402 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 TEX46H3BTG2 121 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 SULT1B1O43704 296 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 GLSO94925 669 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-217ENST00000495688 IGHV4-34P06331 123 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 RAB14P61106 215 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 DMWDQ09019 674 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 HYAL1Q12794 435 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 SKP2Q13309 424 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF626Q68DY1 528 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 WBP2NLQ6ICG8 309 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 SLC35D2Q76EJ3 337 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 BPHLQ86WA6 291 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-217ENST00000495688 OR4C16Q8NGL9 310 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 NSMAFQ92636 917 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 TAAR8Q969N4 342 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 MTIF3Q9H2K0 278 aaKnown RBP11.81□□□□□ -0.52
PTPN7-217ENST00000495688 FBRSQ9HAH7 460 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 RDH8Q9NYR8 311 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 KCNG2Q9UJ96 466 aa11.81□□□□□ -0.52
PTPN7-217ENST00000495688 MRPS33Q9Y291 106 aaKnown RBP11.81□□□□□ -0.52
PTPN7-217ENST00000495688 KIR2DS5A0A0G2JLQ3 304 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 A0A0G2JNG1 304 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 CDC14CA4D256 554 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 KIR2DS3K7RE56 304 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 CLDN4O14493 209 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 SEMA4FO95754 770 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 PROS1P07225 676 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 GUSBP08236 651 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 UBL4AP11441 157 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 GABRG2P18507 467 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 PSMD4P55036 377 aaKnown RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 H2BFSP57053 126 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 IGLV3-21P80748 117 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 KIR2DS5Q14953 304 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 FNDC7Q5VTL7 733 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 FAM198BQ6UWH4 519 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 ZNF595Q8IYB9 648 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 PM20D2Q8IYS1 436 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 ZDHHC1Q8WTX9 485 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 GAL3ST1Q99999 423 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 SLC19A3Q9BZV2 496 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 NXF5Q9H1B4 397 aaKnown RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 FBXL3Q9UKT7 428 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 OR2M5A3KFT3 312 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 C11orf98E9PRG8 122 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 L7N2F9 121 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 ARPC5O15511 151 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 PLGP00747 810 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 ITGA5P08648 1049 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 FREM3P0C091 2139 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 CTSEP14091 401 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 CPN1P15169 458 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 ALOX5APP20292 161 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 M6PRP20645 277 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 CSRP1P21291 193 aaKnown RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 TACR3P29371 465 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 PPM1FP49593 454 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 SLC25A1P53007 311 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 TOMM34Q15785 309 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 LRRN1Q6UXK5 716 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 SPICQ8N5J4 248 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 EID2Q8N6I1 236 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-217ENST00000495688 WBP1Q96G27 269 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 NRSN2Q9GZP1 204 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 PIAS3Q9Y6X2 628 aa11.8□□□□□ -0.52
PTPN7-217ENST00000495688 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms