RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 CHIT1Q13231 466 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 KANK1Q14678 1352 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 ARHGAP19Q14CB8 494 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 KCTD21Q4G0X4 260 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 LRRC74BQ6ZQY2 392 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 RGS9BPQ6ZS82 235 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 TGIF2LXQ8IUE1 241 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 ZNF557Q8N988 423 aaPredicted RBP2.04□□□□□ -2.08
VPS50-219ENST00000495039 EIF1ADQ8N9N8 165 aaKnown RBP2.04□□□□□ -2.08
VPS50-219ENST00000495039 CARMIL3Q8ND23 1372 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 OR2G2Q8NGZ5 317 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 CD300LFQ8TDQ1 290 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 ZFP90Q8TF47 636 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 SGK3Q96BR1 496 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 MED8Q96G25 268 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 SMIM10Q96HG1 83 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 CDHR2Q9BYE9 1310 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 ANKRD19PQ9H560 264 aa2.04□□□□□ -2.08
VPS50-219ENST00000495039 PLAC8L1A1L4L8 177 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 LRCOL1A6NCL2 159 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 HAS3O00219 553 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 CCL21O00585 134 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 CD5LO43866 347 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 SURF6O75683 361 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 BGLAPP02818 100 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 GAPDHP04406 335 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 ZNF30P17039 623 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 OMGP23515 440 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 ATP5C1P36542 298 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 YAP1P46937 504 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 CCR8P51685 355 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 UGT2B15P54855 530 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 SEC61GP60059 68 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 RPS21P63220 83 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 ENPEPQ07075 957 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 SLAQ13239 276 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 EIF4EBP1Q13541 118 aaPredicted RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 FAM71E1Q6IPT2 247 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 CENPPQ6IPU0 288 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 CASC1Q6TDU7 716 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 LYPD2Q6UXB3 125 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 H2BFWTQ7Z2G1 175 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 PEX26Q7Z412 305 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 C12orf56Q8IXR9 622 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 ZNF679Q8IYX0 411 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 TBC1D21Q8IYX1 336 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 ZCCHC7Q8N3Z6 543 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 MREGQ8N565 214 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 ARL6IP6Q8N6S5 226 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 SLC22A8Q8TCC7 542 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 PLEKHA8Q96JA3 519 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 BMFQ96LC9 184 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 TSNARE1Q96NA8 513 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 KCTD14Q9BQ13 255 aaPredicted RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 OSBPL10Q9BXB5 764 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 GON7Q9BXV9 100 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 GABARAPL3Q9BY60 117 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 FN3KRPQ9HA64 309 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 OR12D3Q9UGF7 316 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
VPS50-219ENST00000495039 LRP4O75096 1905 aa2.03□□□□□ -2.08
VPS50-219ENST00000495039 MYO10Q9HD67 2058 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 CEMIPQ8WUJ3 1361 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 IGKV1D-13A0A0B4J2D9 117 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 A0A1B0GVI7 797 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 BTBD17A6NE02 478 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 OR52A4PA6NMU1 304 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 DYNC1I1O14576 645 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 C2P06681 752 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 IGKV1-13P0DP09 117 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 IGFBP3P17936 291 aaPredicted RBP2.02□□□□□ -2.09
VPS50-219ENST00000495039 VHLP40337 213 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 CDH4P55283 916 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 FBXW4P57775 412 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 PRPSAP1Q14558 356 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 ZNF77Q15935 545 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 UBE2SQ16763 222 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 TTLL9Q3SXZ7 439 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 LINC00173Q6ZV60 143 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 PUSL1Q8N0Z8 303 aaKnown RBP2.02□□□□□ -2.09
VPS50-219ENST00000495039 CEP112Q8N8E3 955 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 CYB561D1Q8N8Q1 229 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 OR2L8Q8NGY9 312 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 PHF10Q8WUB8 498 aaKnown RBP2.02□□□□□ -2.09
VPS50-219ENST00000495039 TSSK3Q96PN8 268 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 NPY6RQ99463 290 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 ZBTB18Q99592 522 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 SH3GL1Q99961 368 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 SH3GL3Q99963 347 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 RARRES2Q99969 163 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 TMEM59Q9BXS4 323 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 NT5C3AQ9H0P0 336 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 UGT1A7Q9HAW7 530 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 UGT1A10Q9HAW8 530 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 UGT1A8Q9HAW9 530 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 INPP5EQ9NRR6 644 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 NECAP2Q9NVZ3 263 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 ZNF282Q9UDV7 671 aaPredicted RBP2.02□□□□□ -2.09
VPS50-219ENST00000495039 CD84Q9UIB8 345 aa2.02□□□□□ -2.09
VPS50-219ENST00000495039 ZNF639Q9UID6 485 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms