RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PPIAL4AQ9Y536 164 aa12.18□□□□□ -0.46
VARS-228ENST00000495010 GPR45Q9Y5Y3 372 aa12.18□□□□□ -0.46
VARS-228ENST00000495010 IGHV1-69-2A0A0G2JMI3 117 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 CLDN25C9JDP6 229 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 CLPTM1O96005 669 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 ZCCHC18P0CG32 403 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 BGNP21810 368 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 DRD4P21917 467 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 GATA3P23771 443 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 CRYBB2P43320 205 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
VARS-228ENST00000495010 RBBP4Q09028 425 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 ZP4Q12836 540 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 MOGQ16653 247 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 HFEQ30201 348 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 C6orf10Q5SRN2 563 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 NXNQ6DKJ4 435 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 TMEM53Q6P2H8 277 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 ULK3Q6PHR2 472 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 PIWIL3Q7Z3Z3 882 aaKnown RBP12.17□□□□□ -0.46
VARS-228ENST00000495010 RETREG3Q86VR2 466 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 LSMEM1Q8N8F7 131 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 ZDHHC22Q8N966 263 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 SCAIQ8N9R8 606 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 ICA1LQ8NDH6 482 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 SLC30A7Q8NEW0 376 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 OR6S1Q8NH40 331 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 C22orf15Q8WYQ4 148 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 RAB1CQ92928 201 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 OR51B6Q9H340 312 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 TMEM27Q9HBJ8 222 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 BCL2L10Q9HD36 194 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 ZNF224Q9NZL3 707 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 HAO1Q9UJM8 370 aa12.17□□□□□ -0.46
VARS-228ENST00000495010 IGKV1D-42A0A075B6H8 117 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 TRPC5OSA6NMA1 111 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 SDHDO14521 159 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 TM9SF1O15321 606 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 PRSS23O95084 383 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 OR6A2O95222 327 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 FARS2O95363 451 aaKnown RBP12.16□□□□□ -0.46
VARS-228ENST00000495010 PATE4P0C8F1 98 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 OR8G3PP0DMU2 310 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 IDO1P14902 403 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 EPHA3P29320 983 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 PRKAR1BP31321 381 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 PDLIM3Q53GG5 364 aaPredicted RBP12.16□□□□□ -0.46
VARS-228ENST00000495010 FAM91A1Q658Y4 838 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 USP51Q70EK9 711 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 PXKQ7Z7A4 578 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 SKA3Q8IX90 412 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 SLC22A24Q8N4F4 322 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 SLC41A3Q96GZ6 507 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
VARS-228ENST00000495010 LRMDAQ9H2I8 198 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 C1orf198Q9H425 327 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 WDR55Q9H6Y2 383 aaPredicted RBP12.16□□□□□ -0.46
VARS-228ENST00000495010 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 NKIRAS2Q9NYR9 191 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 WIPI2Q9Y4P8 454 aa12.16□□□□□ -0.46
VARS-228ENST00000495010 MGAM2Q2M2H8 2515 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 DEAF1O75398 565 aaPredicted RBP12.15□□□□□ -0.46
VARS-228ENST00000495010 PTHP01270 115 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 BGLAPP02818 100 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 NUDT7P0C024 238 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 HKR1P10072 659 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 ETS2P15036 469 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 HTR2AP28223 471 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 BIDP55957 195 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 DEFA6Q01524 100 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 RGNQ15493 299 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 TSTQ16762 297 aaKnown RBP12.15□□□□□ -0.46
VARS-228ENST00000495010 TBC1D28Q2M2D7 210 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 GTDC1Q4AE62 458 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 MSANTD1Q6ZTZ1 278 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 ZNF771Q7L3S4 317 aaPredicted RBP12.15□□□□□ -0.46
VARS-228ENST00000495010 KRT73Q86Y46 540 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 ZNF584Q8IVC4 421 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 OR1J2Q8NGS2 313 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 ZNF519Q8TB69 540 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 MAL2Q969L2 176 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 TSPAN32Q96QS1 320 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 SPATA5L1Q9BVQ7 753 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 BCL2L14Q9BZR8 327 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 MRPL39Q9NYK5 338 aaKnown RBP12.15□□□□□ -0.46
VARS-228ENST00000495010 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
VARS-228ENST00000495010 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.47
VARS-228ENST00000495010 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 IQCMA0A1B0GVH7 501 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 ISPDA4D126 451 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 C11orf98E9PRG8 122 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 CLIC1O00299 241 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 PLPP3O14495 311 aa12.14□□□□□ -0.47
VARS-228ENST00000495010 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
VARS-228ENST00000495010 ADORA3P0DMS8 318 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms