RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MELK	Q14680	651 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	MEST	Q5EB52	335 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	SLC35F1	Q5T1Q4	408 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	NXNL2	Q5VZ03	156 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	LEG1	Q6P5S2	330 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	NHLRC1	Q6VVB1	395 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	TUSC5	Q8IXB3	177 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	ZNF100	Q8IYN0	542 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	TCEANC	Q8N8B7	351 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	C9orf106	Q8NAJ2	232 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	SLC37A3	Q8NCC5	494 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	OR6N1	Q8NGY5	312 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	OR4K13	Q8NH42	304 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	RASD2	Q96D21	266 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	MUS81	Q96NY9	551 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	OR2M2	Q96R28	347 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	KCNK17	Q96T54	332 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	TTYH2	Q9BSA4	534 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	SLCO5A1	Q9H2Y9	848 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
APTX-231	ENST00000494973	MOK	Q9UQ07	419 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	LRCH1	Q9Y2L9	728 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	LRRC42	Q9Y546	428 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	FKBP7	Q9Y680	259 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	SHANK1	Q9Y566	2161 aa		12.03	□□□□□ -0.48
APTX-231	ENST00000494973	ARHGAP21	Q5T5U3	1957 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	BOD1L1	Q8NFC6	3051 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	IRGM	A1A4Y4	181 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	SLC22A31	A6NKX4	558 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	TLX2	O43763	284 aa	Predicted RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	TRMU	O75648	421 aa	Known RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	KRT33A	O76009	404 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF432	O94892	652 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	PGA4	P0DJD7	388 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	PGA3	P0DJD8	388 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	KLK2	P20151	261 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	CEACAM8	P31997	349 aa	Predicted RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	OPRM1	P35372	400 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	GUCA1A	P43080	201 aa	Predicted RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	CRMP1	Q14194	572 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	GUSBP1	Q15486	140 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	OCLN	Q16625	522 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	SLC35D3	Q5M8T2	416 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	RTL6	Q6ICC9	239 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	CXXC5	Q7LFL8	322 aa	Known RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	GPR137C	Q8N3F9	429 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	ZIC4	Q8N9L1	334 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	SDR9C7	Q8NEX9	313 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF385A	Q96PM9	386 aa	Known RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	NMNAT3	Q96T66	252 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	MRPL13	Q9BYD1	178 aa	Known RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	RACGAP1	Q9H0H5	632 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	PIGM	Q9H3S5	423 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	GLTP	Q9NZD2	209 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	TINAG	Q9UJW2	476 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	ING1	Q9UK53	422 aa	Predicted RBP	12.02	□□□□□ -0.49
APTX-231	ENST00000494973	BLOC1S6	Q9UL45	172 aa		12.02	□□□□□ -0.49
APTX-231	ENST00000494973	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.01	□□□□□ -0.49
APTX-231	ENST00000494973	DOCK7	Q96N67	2140 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	SLC22A23	A1A5C7	686 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	PRKY	O43930	277 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	KHDRBS3	O75525	346 aa	Known RBP	12.01	□□□□□ -0.49
APTX-231	ENST00000494973	GLI4	P10075	376 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	CTSS	P25774	331 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	OR3A2	P47893	321 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF84	P51523	738 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	SH3BGR	P55822	239 aa	Predicted RBP	12.01	□□□□□ -0.49
APTX-231	ENST00000494973	CXCR4	P61073	352 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	ISL1	P61371	349 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	EFNB1	P98172	346 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	TLE1	Q04724	770 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	GLO1	Q04760	184 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	CAMK2D	Q13557	499 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	C20orf196	Q8IYI0	205 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	ENTHD1	Q8IYW4	607 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	TMEM123	Q8N131	208 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	MARVELD2	Q8N4S9	558 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	CNEP1R1	Q8N9A8	125 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	NPEPL1	Q8NDH3	523 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	RHOXF1	Q8NHV9	184 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	RND1	Q92730	232 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	HDAC2	Q92769	488 aa	Known RBP	12.01	□□□□□ -0.49
APTX-231	ENST00000494973	TMEM54	Q969K7	222 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	TXNDC15	Q96J42	360 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	CNBD2	Q96M20	576 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	EMC6	Q9BV81	110 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	ULBP2	Q9BZM5	246 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	SYT4	Q9H2B2	425 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	UPB1	Q9UBR1	384 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.01	□□□□□ -0.49
APTX-231	ENST00000494973	PROCR	Q9UNN8	238 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	RNF6	Q9Y252	685 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	MEMO1	Q9Y316	297 aa		12.01	□□□□□ -0.49
APTX-231	ENST00000494973	PHF3	Q92576	2039 aa	Known RBP	12.01	□□□□□ -0.49
APTX-231	ENST00000494973	POLE	Q07864	2286 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	IGSF10	Q6WRI0	2623 aa		12	□□□□□ -0.49
APTX-231	ENST00000494973	PRRC2C	Q9Y520	2896 aa	Known RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	KDM4E	B2RXH2	506 aa	Predicted RBP	12	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF587B	E7ETH6	402 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms