RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 GALNT9Q9HCQ5 603 aa17.64■□□□□ 0.42
COL27A1-207ENST00000494090 DHCR7Q9UBM7 475 aaKnown RBP17.64■□□□□ 0.42
COL27A1-207ENST00000494090 MRPS28Q9Y2Q9 187 aaKnown RBP17.64■□□□□ 0.42
COL27A1-207ENST00000494090 NKX6-3A6NJ46 265 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 LIM2P55344 173 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 AADACL3Q5VUY0 350 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 SMIM3Q9BZL3 60 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 C1orf123Q9NWV4 160 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 BTAF1O14981 1849 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 C17orf112F2Z3M2 114 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 SLC9A3R2Q15599 337 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 ELAVL1Q15717 326 aaKnown RBP17.64■□□□□ 0.41
COL27A1-207ENST00000494090 DHRS4L2Q6PKH6 230 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 FBXW12Q6X9E4 464 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 OR5H6Q8NGV6 325 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 ATOH1Q92858 354 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-207ENST00000494090 DAZAP1Q96EP5 407 aaKnown RBP17.64■□□□□ 0.41
COL27A1-207ENST00000494090 PBX4Q9BYU1 374 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 ZDHHC5Q9C0B5 715 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 MED6O75586 246 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 EN2P19622 333 aaPredicted RBP17.64■□□□□ 0.41
COL27A1-207ENST00000494090 RAB6AP20340 208 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 PGFP49763 221 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 GRB2P62993 217 aaKnown RBP17.64■□□□□ 0.41
COL27A1-207ENST00000494090 GABREP78334 506 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 FCN2Q15485 313 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 FAM26EQ8N5C1 309 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 SUMF2Q8NBJ7 301 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 PRR14Q9BWN1 585 aa17.64■□□□□ 0.41
COL27A1-207ENST00000494090 MSTNO14793 375 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 SCAF4O95104 1147 aaKnown RBP17.63■□□□□ 0.41
COL27A1-207ENST00000494090 MRPL58Q14197 206 aaKnown RBP17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF674Q2M3X9 581 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF813Q6ZN06 617 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 OR4D6Q8NGJ1 314 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 CDCA4Q9BXL8 241 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 RGS11O94810 467 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 GLCEO94923 617 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ATP1B1P05026 303 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ECI1P42126 302 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 SCGB2A2Q13296 93 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 IL10RAQ13651 578 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 SMAD2Q15796 467 aaKnown RBP17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF77Q15935 545 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 RBM45Q8IUH3 476 aaKnown RBP17.63■□□□□ 0.41
COL27A1-207ENST00000494090 RIMKLAQ8IXN7 391 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 MS4A6EQ96DS6 147 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 C4orf47A7E2U8 309 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 HMGN4O00479 90 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 BRICD5Q6PL45 260 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 OLIG3Q7RTU3 272 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 GRINAQ7Z429 371 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 SERTAD4Q9NUC0 356 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 MMP17Q9ULZ9 603 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 PHIPQ8WWQ0 1821 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 LRP5LA4QPB2 252 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 DDOSTP39656 456 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 NKX6-1P78426 367 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-207ENST00000494090 DUSP6Q16828 381 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 BEX5Q5H9J7 111 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ESX1Q8N693 406 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 DUSP22Q9NRW4 184 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 TMEM30AQ9NV96 361 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 ASB1Q9Y576 335 aa17.63■□□□□ 0.41
COL27A1-207ENST00000494090 SBK3P0C264 359 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 SRMP19623 302 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 TPMTP51580 245 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 DPTQ07507 201 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 FAPQ12884 760 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 RSPO2Q6UXX9 243 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-207ENST00000494090 ANKRD33Q7Z3H0 272 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 FRZBQ92765 325 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 ASB16Q96NS5 453 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 ESPNLQ6ZVH7 1005 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 SVBPQ8N300 66 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 ANKRD9Q96BM1 317 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-207ENST00000494090 PHF7Q9BWX1 381 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-207ENST00000494090 CALHM2Q9HA72 323 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 TNFRSF12AQ9NP84 129 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 PRELID3BQ9Y3B1 194 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 ZNF254O75437 659 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 TRAPPC2P0DI81 140 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 TRAPPC2BP0DI82 140 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 CAMK2BQ13554 666 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 SLC22A25Q6T423 547 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 GJC3Q8NFK1 279 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 HRH4Q9H3N8 390 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 DUSP21Q9H596 190 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 TRABD2BA6NFA1 517 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 LRRC30A6NM36 301 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 STK17BO94768 372 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 BTG1P62324 171 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 DMBX1Q8NFW5 382 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-207ENST00000494090 STEAP1BQ6NZ63 245 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 ALKAL2Q6UX46 152 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 LINC00696Q6ZRV3 163 aa17.62■□□□□ 0.41
COL27A1-207ENST00000494090 GMDSO60547 372 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 MSL3P1P0C860 447 aa17.61■□□□□ 0.41
COL27A1-207ENST00000494090 CREB3L2Q70SY1 520 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms