RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ELP5Q8TE02 316 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RSC1A1Q92681 617 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RORBQ92753 470 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 DDIT4LQ96D03 193 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SMIM10Q96HG1 83 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PPP1R16AQ96I34 528 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 STACQ99469 402 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SSX3Q99909 188 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZPBPQ9BS86 351 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 COPS4Q9BT78 406 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ELOVL1Q9BW60 279 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GSDMCQ9BYG8 508 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAM234AQ9H0X4 552 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CHODLQ9H9P2 273 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 LMAN1LQ9HAT1 526 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ADGRL4Q9HBW9 690 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PCDHB16Q9NRJ7 776 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SDHAF3Q9NRP4 125 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMLHEQ9NVH6 421 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GAR1Q9NY12 217 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TAS2R16Q9NYV7 291 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CACFD1Q9UGQ2 172 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SHPKQ9UHJ6 478 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 KCNG2Q9UJ96 466 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF580Q9UK33 172 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CDH9Q9ULB4 789 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 AURKCQ9UQB9 309 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ENPP4Q9Y6X5 453 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ASPMQ8IZT6 3477 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A087WWC5 75 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 A0A0A6YYD5 115 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CD8B2A6NJW9 211 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SNTNA6NMZ2 147 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 NR5A2O00482 541 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PIN1P1O15428 100 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC28A2O43868 658 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SLC25A12O75746 678 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GRAP2O75791 330 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ATG12O94817 140 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 UBL3O95164 117 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 NDUFB8O95169 186 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 HIST1H2AGP0C0S8 130 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PSKH1P11801 424 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM11P17152 192 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 HIST1H2ADP20671 130 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CA8P35219 290 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACAA2P42765 397 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF136P52737 540 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CRISP1P54107 249 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 UBE2IP63279 158 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GTF3C1Q12789 2109 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 AIMP2Q13155 320 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RPA4Q13156 261 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 MAB21L1Q13394 359 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FCN2Q15485 313 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TRAM1Q15629 374 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TAB1Q15750 504 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM176BQ3YBM2 270 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 HENMT1Q5T8I9 393 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 HIST2H2AA3Q6FI13 130 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAHD2BQ6P2I3 314 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ZNF322Q6U7Q0 402 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ISLR2Q6UXK2 745 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 LRRC8DQ7L1W4 858 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TAS2R42Q7RTR8 314 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GID4Q8IVV7 300 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CCNYQ8ND76 341 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 STAG3L4Q8TBR4 150 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SFXN5Q8TD22 340 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 GANCQ8TET4 914 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACOT11Q8WXI4 607 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FAHD2AQ96GK7 314 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FOPNLQ96NB1 174 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ACBD6Q9BR61 282 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CINPQ9BW66 212 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 MVB12BQ9H7P6 319 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CDH20Q9HBT6 801 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 HCFC1R1Q9NWW0 138 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TAS2R10Q9NYW0 307 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 COQ3Q9NZJ6 369 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 MRPS18CQ9Y3D5 142 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 TMEM184BQ9Y519 407 aaPredicted RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PCDHGA5Q9Y5G8 931 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RAI2Q9Y5P3 530 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 KIR2DL5BA0A0G2JN68 375 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 KIR2DL5BA0A0G2JPC4 375 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 NAP1L6A6NFF2 107 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PRR32B1ATL7 298 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 NPIPA2E9PIF3 369 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 H7C0C1 242 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CDC7O00311 574 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 ENTPD6O75354 484 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 OR2B3O76000 313 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 FGF19O95750 216 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 RAB36O95755 333 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 WNT1P04628 370 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 CNPP09543 421 aaKnown RBP2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SERPINB1P30740 379 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 PTGER3P43115 390 aa2.26□□□□□ -2.05
CDC42EP3-205ENST00000494083 SERPINH1P50454 418 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms