RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 ACTR3BQ9P1U1 418 aa14.09□□□□□ -0.15
SATB1-217ENST00000493952 CRNNQ9UBG3 495 aaPredicted RBP14.09□□□□□ -0.15
SATB1-217ENST00000493952 LAMP3Q9UQV4 416 aa14.09□□□□□ -0.15
SATB1-217ENST00000493952 ARFGEF3Q5TH69 2177 aa14.09□□□□□ -0.15
SATB1-217ENST00000493952 ZNF469Q96JG9 3925 aaPredicted RBP14.09□□□□□ -0.15
SATB1-217ENST00000493952 CHD3Q12873 2000 aaKnown RBP14.08□□□□□ -0.15
SATB1-217ENST00000493952 IGHV1-18A0A0C4DH31 117 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 TRBV4-1A0A0J9YWV2 114 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 A0A1W2PRQ8 180 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 MCIDASD6RGH6 385 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 CDC42EP2O14613 210 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 PDE5AO76074 875 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 HOXB1P14653 301 aaPredicted RBP14.08□□□□□ -0.16
SATB1-217ENST00000493952 B4GALT1P15291 398 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 DAP3P51398 398 aaKnown RBP14.08□□□□□ -0.16
SATB1-217ENST00000493952 DGCR6Q14129 220 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 PGGHGQ32M88 737 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 ARMC4Q5T2S8 1044 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 LRFN4Q6PJG9 635 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 ZNF813Q6ZN06 617 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 TMPRSS11FQ6ZWK6 438 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 ZNF627Q7L945 461 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 LRRC75A-AS1Q8N1F1 130 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 LRRC75AQ8NAA5 344 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 NOXO1Q8NFA2 376 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 OR51A7Q8NH64 312 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 SMAP2Q8WU79 429 aaPredicted RBP14.08□□□□□ -0.16
SATB1-217ENST00000493952 TMEM171Q8WVE6 324 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 FAM46AQ96IP4 442 aaKnown RBP14.08□□□□□ -0.16
SATB1-217ENST00000493952 SLC38A2Q96QD8 506 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 ZNF347Q96SE7 839 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 SEPHS2Q99611 448 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 TAS2R1Q9NYW7 299 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 POFUT2Q9Y2G5 429 aa14.08□□□□□ -0.16
SATB1-217ENST00000493952 TEP1Q99973 2627 aaKnown RBP14.08□□□□□ -0.16
SATB1-217ENST00000493952 NPIPB13A6NJU9 1138 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 NPIPB4C9JG80 1138 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 E7EQL1 145 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 ATP6V1G2-DDX39BF2Z307 99 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 UBOX5O94941 541 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 IGKV3-15P01624 115 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 IGHG1P01857 330 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 ACADSP16219 412 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 ITGA2P17301 1181 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 PAX7P23759 505 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 CAPZA2P47755 286 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 SLC9A3P48764 834 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 CLRN1P58418 232 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 ADAM8P78325 824 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 NKX6-1P78426 367 aaPredicted RBP14.07□□□□□ -0.16
SATB1-217ENST00000493952 SEC23BQ15437 767 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 HIST3H3Q16695 136 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 RRM2BQ7LG56 351 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 OAFQ86UD1 273 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 MDP1Q86V88 176 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 MYPOPQ86VE0 399 aaPredicted RBP14.07□□□□□ -0.16
SATB1-217ENST00000493952 IGFN1Q86VF2 1251 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 CDK20Q8IZL9 346 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 SYT14Q8NB59 555 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 OR52J3Q8NH60 311 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 PERPQ96FX8 193 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 TNFRSF13CQ96RJ3 184 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 FOXB1Q99853 325 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 FUZQ9BT04 418 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 MRPL13Q9BYD1 178 aaKnown RBP14.07□□□□□ -0.16
SATB1-217ENST00000493952 C1orf21Q9H246 121 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 TXNIPQ9H3M7 391 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 SEC61A2Q9H9S3 476 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 NOX3Q9HBY0 568 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 POU2F3Q9UKI9 436 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 PRPF19Q9UMS4 504 aaKnown RBP14.07□□□□□ -0.16
SATB1-217ENST00000493952 MOKQ9UQ07 419 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 VPS13CQ709C8 3753 aa14.07□□□□□ -0.16
SATB1-217ENST00000493952 FLNAP21333 2647 aaKnown RBP14.06□□□□□ -0.16
SATB1-217ENST00000493952 TCRBV5S2A0A599 114 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 CENPBD1B2RD01 187 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 TRMUO75648 421 aaKnown RBP14.06□□□□□ -0.16
SATB1-217ENST00000493952 IGLV1-44P01699 117 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 IGHMP01871 453 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 FABP3P05413 133 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 CELA3BP08861 270 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 QDPRP09417 244 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 CECR9P0C854 216 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 CBR1P16152 277 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 LIMS1P48059 325 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 CTXN1P60606 82 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 MYBPC1Q00872 1141 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 MS4A2Q01362 244 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 SPIBQ01892 262 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 TOP3AQ13472 1001 aaPredicted RBP14.06□□□□□ -0.16
SATB1-217ENST00000493952 C3orf36Q3SXR2 165 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 ANKDD1AQ495B1 522 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 LCN8Q6JVE9 175 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 HDDC2Q7Z4H3 204 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 TGIF2LYQ8IUE0 185 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 CCDC36Q8IYA8 594 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 DEPDC4Q8N2C3 294 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 FAM169BQ8N8A8 192 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 WFDC11Q8NEX6 87 aa14.06□□□□□ -0.16
SATB1-217ENST00000493952 OR4K5Q8NGD3 323 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms