RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 STAG3L4Q8TBR4 150 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 RASD2Q96D21 266 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF382Q96SR6 550 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 AIF1LQ9BQI0 150 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 ATG101Q9BSB4 218 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 ULBP3Q9BZM4 244 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 SOX17Q9H6I2 414 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-222ENST00000493919 USE1Q9NZ43 259 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 PCDHA9Q9Y5H5 950 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 ACACAQ13085 2346 aa10.57□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF27A3QJZ7 478 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF25A6NGN4 478 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 LGALS8O00214 317 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 BHLHE40O14503 412 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 NME2P1O60361 137 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF4O60810 478 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SERPINA3P01011 423 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 CRHBPP24387 322 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 STOMP27105 288 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 IFNGR2P38484 337 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PCBP4P57723 403 aaKnown RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ERVPABLB-1P60509 514 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PRDX1Q06830 199 aaKnown RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 LARS2Q15031 903 aaKnown RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ZXDCQ2QGD7 858 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SLC35F1Q5T1Q4 408 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF5Q5TYX0 476 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF9Q5VWM5 478 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PRAMEF6Q5VXH4 476 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 B3GNTL1Q67FW5 361 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF529Q6P280 563 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 CLEC14AQ86T13 490 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 C17orf64Q86WR6 236 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 WDFY1Q8IWB7 410 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SULF2Q8IWU5 870 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 NLGN4YQ8NFZ3 816 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SCARB1Q8WTV0 552 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ESAMQ96AP7 390 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 LGALS12Q96DT0 336 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 CNTNAP3BQ96NU0 1288 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 STACQ99469 402 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SDHCQ99643 169 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 CNTNAP3Q9BZ76 1288 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TSPAN10Q9H1Z9 355 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF385DQ9H6B1 395 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 NUDT4Q9NZJ9 180 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SH2B3Q9UQQ2 575 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 MAP1BP46821 2468 aaKnown RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 CROCCQ5TZA2 2017 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 A0A1B0GVI7 797 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 OR6C68A6NDL8 312 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 FAM171A2A8MVW0 826 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PTGES3LE9PB15 166 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ACOT8O14734 319 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 FABP7O15540 132 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 HCRTR1O43613 425 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TCF21O43680 179 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TLX3O43711 291 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TIAF1O95411 115 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 POU3F2P20265 443 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 GCH1P30793 250 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 GDF5P43026 501 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 LSM6P62312 80 aaKnown RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 MVKQ03426 396 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 KLF10Q13118 480 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 IL11RAQ14626 422 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TECRLQ5HYJ1 363 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 NCMAPQ5T1S8 102 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SYT6Q5T7P8 510 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 LCTLQ6UWM7 567 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SSX7Q7RTT5 188 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 VTCN1Q7Z7D3 282 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 LDLRAD3Q86YD5 345 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 GPR135Q8IZ08 494 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 FAM86B1Q8N7N1 296 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 OR1L3Q8NH93 324 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SELENOMQ8WWX9 145 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 FGF11Q92914 225 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ZNF501Q96CX3 271 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 CCDC126Q96EE4 140 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SAMD8Q96LT4 415 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 ATOH8Q96SQ7 321 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 PHB2Q99623 299 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 VPS25Q9BRG1 176 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SLC30A2Q9BRI3 323 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SGPP1Q9BX95 441 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 SIRT3Q9NTG7 399 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-222ENST00000493919 RAXQ9Y2V3 346 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 TMEM56-RWDD3S4R434 201 aa10.56□□□□□ -0.72
BRCA1-222ENST00000493919 AHCTF1Q8WYP5 2266 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 SDK2Q58EX2 2172 aa10.55□□□□□ -0.72
BRCA1-222ENST00000493919 IGKV1-8A0A0C4DH67 115 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms