RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 METAP1DQ6UB28 335 aaPredicted RBP12.5□□□□□ -0.41
VCP-207ENST00000493886 CDH24Q86UP0 819 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 ZNF441Q8N8Z8 693 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 GRPEL2Q8TAA5 225 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 ZNRF4Q8WWF5 429 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 U3KQA8 63 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 TEX13CA0A0J9YWL9 993 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 A0A1W2PQD3 144 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 C17orf51A8MQB3 221 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 FABP7O15540 132 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 SLC19A2O60779 497 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 SLC43A1O75387 559 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 OR2T7P0C7T2 308 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 ASAH2BP0C7U1 165 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 SNRPBP14678 240 aaKnown RBP12.5□□□□□ -0.41
VCP-207ENST00000493886 SPI1P17947 270 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 HOXA6P31267 233 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 THBS2P35442 1172 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 LTBQ06643 244 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 RABEPKQ7Z6M1 372 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 SLC35F2Q8IXU6 374 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 LRRC75AQ8NAA5 344 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 OR2T27Q8NH04 317 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 GCDHQ92947 438 aaPredicted RBP12.5□□□□□ -0.41
VCP-207ENST00000493886 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
VCP-207ENST00000493886 Q96M85 177 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 TGIF2Q9GZN2 237 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 SLC23A1Q9UHI7 598 aa12.5□□□□□ -0.41
VCP-207ENST00000493886 IGHV3-20A0A0C4DH32 117 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 A0A1W2PQM1 296 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 SIGLEC6O43699 453 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 CD14P08571 375 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 ITPKBP27987 946 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 MTNR1BP49286 362 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 CCL7P80098 99 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 SQSTM1Q13501 440 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 TRAM1Q15629 374 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 NTRK2Q16620 822 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 ALG10Q5BKT4 473 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 SLC35D3Q5M8T2 416 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 BEND4Q6ZU67 534 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 LRRC28Q86X40 367 aaPredicted RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 SLC38A9Q8NBW4 561 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 PCNPQ8WW12 178 aaKnown RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 HSD17B8Q92506 261 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 OR6C1Q96RD1 312 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 CYSLTR2Q9NS75 346 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 EIF4E2O60573 245 aaKnown RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 ANKRD34CP0C6C1 535 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 RNF224P0DH78 156 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 SLC6A1P30531 599 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 PITPNBP48739 271 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 CCR6P51684 374 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 CTXN1P60606 82 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 TOMM34Q15785 309 aaPredicted RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 DMKNQ6E0U4 476 aaPredicted RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 LEG1Q6P5S2 330 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 LPAR4Q99677 370 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 PILRBQ9UKJ0 227 aa12.49□□□□□ -0.41
VCP-207ENST00000493886 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
VCP-207ENST00000493886 PSMD9O00233 223 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
VCP-207ENST00000493886 TIAF1O95411 115 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 BTCP35070 178 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
VCP-207ENST00000493886 S100A12P80511 92 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 DGCR2P98153 550 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 HLA-BQ31612 363 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 LYPD4Q6UWN0 246 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 OR6K6Q8NGW6 343 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 ABHD4Q8TB40 342 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 GHSRQ92847 366 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 MED28Q9H204 178 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 SUSD2Q9UGT4 822 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 SLC6A5Q9Y345 797 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 IGLV3-12A0A075B6K2 115 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 C4orf47A7E2U8 309 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 BET1O15155 118 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 SELENOFO60613 162 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 NUDT14O95848 222 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 ACTA2P62736 377 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 ACTG2P63267 376 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 IL10RAQ13651 578 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 PRSS45Q7RTY3 260 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 SYS1Q8N2H4 156 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 TAAR8Q969N4 342 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 RADILQ96JH8 1075 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 TRAF4Q9BUZ4 470 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms