RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ARNTP27540 789 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 RPS25P62851 125 aaKnown RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SIRPAP78324 504 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 RUNX3Q13761 415 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 EXOSC7Q15024 291 aaKnown RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 FCN2Q15485 313 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SMAD2Q15796 467 aaKnown RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 RNF212Q495C1 297 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 PLK5Q496M5 336 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 WDR88Q6ZMY6 472 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SIAH3Q8IW03 269 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SLC38A6Q8IZM9 456 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 OR14A16Q8NHC5 309 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SLC25A21Q9BQT8 299 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 PARD6AQ9NPB6 346 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 STARD5Q9NSY2 213 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ACSS1Q9NUB1 689 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 CDC42BPAQ5VT25 1732 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 CEP170BQ9Y4F5 1589 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 I6L893 689 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 F13BP05160 661 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 HOXC5Q00444 222 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 REEP5Q00765 189 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 MS4A2Q01362 244 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 BAK1Q16611 211 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 KLHDC8BQ8IXV7 354 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 GAREM1Q9H706 876 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 VRTNQ9H8Y1 702 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 SDR39U1Q9NRG7 319 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-221ENST00000493795 VAPAQ9P0L0 249 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 KCNG2Q9UJ96 466 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 MADDQ8WXG6 1647 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF541Q9H0D2 1346 aa7.29□□□□□ -1.24
BRCA1-221ENST00000493795 KIR2DS1A0A191URI9 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 RFPL4AA6NLU0 287 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 RFPL4AL1F8VTS6 287 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 PRAMEF26H0Y7S4 382 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 SMLR1H3BR10 107 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 ST8SIA3O43173 380 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CR2P20023 1033 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 TACR1P25103 407 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CCKARP32238 428 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF93P35789 620 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-221ENST00000493795 KIR2DS4P43632 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 NPY4RP50391 375 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CLDN12P56749 244 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 TSPAN31Q12999 210 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 KIR2DS1Q14954 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CCL14Q16627 93 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 HAGHQ16775 308 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 TMEM176BQ3YBM2 270 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF468Q5VIY5 522 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-221ENST00000493795 MFSD12Q6NUT3 480 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 NLRC3Q7RTR2 1065 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 TMEM135Q86UB9 458 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CDH26Q8IXH8 852 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 OR5D18Q8NGL1 313 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 SLC46A1Q96NT5 459 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 DUSP23Q9BVJ7 150 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 TPSD1Q9BZJ3 242 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 KIR2DS5A0A0G2JLQ3 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 A0A0G2JNG1 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 NPIPB15A6NHN6 443 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-221ENST00000493795 RNASEK-C17orf49H0YIS7 233 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 KIR2DS3K7RE56 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 P2RY10O00398 339 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 DCTN6O00399 190 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 LGI1O95970 557 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CTXN2P0C2S0 81 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 ZNF85Q03923 595 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 KIR2DS5Q14953 304 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 DEFB133Q30KQ1 61 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 UBE3DQ7Z6J8 389 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 EID2Q8N6I1 236 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 GPR26Q8NDV2 337 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 OR13C2Q8NGS9 318 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 MOCOSQ96EN8 888 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 UTP23Q9BRU9 249 aaKnown RBP7.28□□□□□ -1.24
BRCA1-221ENST00000493795 PCED1AQ9H1Q7 454 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 C12orf10Q9HB07 376 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 P4HTMQ9NXG6 502 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 HSFX1Q9UBD0 423 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 GLTPD2A6NH11 291 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 FAM72CH0Y354 149 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CRXO43186 299 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-221ENST00000493795 JTBO76095 146 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CPMP14384 443 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 P2RY2P41231 377 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 ADPRMQ3LIE5 342 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 FAM72AQ5TYM5 149 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 KDM4DQ6B0I6 523 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 FAM72DQ6L9T8 149 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 LETMD1Q6P1Q0 360 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 SHISA6Q6ZSJ9 500 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CBLL1Q75N03 491 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 ADIPOR2Q86V24 386 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 FAM72BQ86X60 149 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CDC20BQ86Y33 519 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 LAX1Q8IWV1 398 aa7.28□□□□□ -1.24
BRCA1-221ENST00000493795 CLDN22Q8N7P3 220 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms