RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 FAHD1Q6P587 224 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ESPNLQ6ZVH7 1005 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 CHMP1BQ7LBR1 199 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 NANOGNBQ7Z5D8 188 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 GALNT5Q7Z7M9 940 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 PACRGLQ8N7B6 248 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 OR13C2Q8NGS9 318 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 OR2V1Q8NHB1 315 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 FANK1Q8TC84 345 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 NRG4Q8WWG1 115 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ZHX1-C8orf76Q96EF9 292 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 NIPSNAP1Q9BPW8 284 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 DGCR6LQ9BY27 220 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 NDEL1Q9GZM8 345 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 FKRPQ9H9S5 495 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 TIGARQ9NQ88 270 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 USE1Q9NZ43 259 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ENOPH1Q9UHY7 261 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ZNF229Q9UJW7 825 aa10.8□□□□□ -0.68
UPF3A-210ENST00000493727 ARID1AO14497 2285 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 H3BN98 237 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 NPIPB7O75200 414 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 OR6A2O95222 327 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 BGLAPP02818 100 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 CPN1P15169 458 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 FUT1P19526 365 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 GRPRP30550 384 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 GSSP48637 474 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 SLC9A3P48764 834 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 DIO1P49895 249 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 LHX2P50458 406 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 CLDN20P56880 219 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 SLC35A1P78382 337 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 PPP2R2BQ00005 443 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 TSPAN31Q12999 210 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 BCL2A1Q16548 175 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 SGCBQ16585 318 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 EEF1A1P5Q5VTE0 462 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 TMPPEQ6ZT21 453 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 TMPRSS11FQ6ZWK6 438 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 SLC46A3Q7Z3Q1 461 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 OAFQ86UD1 273 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 OR6S1Q8NH40 331 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 MFSD8Q8NHS3 518 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 MBD6Q96DN6 1003 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 MOGAT1Q96PD6 335 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 TM9SF2Q99805 663 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 SLC29A1Q99808 456 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 TACO1Q9BSH4 297 aaKnown RBP10.79□□□□□ -0.68
UPF3A-210ENST00000493727 PTDSS2Q9BVG9 487 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 SFXN3Q9BWM7 321 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 RIBC2Q9H4K1 309 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 PAQR5Q9NXK6 330 aaPredicted RBP10.79□□□□□ -0.68
UPF3A-210ENST00000493727 PLEKHA6Q9Y2H5 1048 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 ZANQ9Y493 2812 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 PCNX3Q9H6A9 2034 aa10.79□□□□□ -0.68
UPF3A-210ENST00000493727 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 TRAV27A0A087WT01 109 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 A0A0J9YW62 118 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 LIPT2A6NK58 231 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 EEF1E1-BLOC1S5C9J1V9 151 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 H0YC42 278 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 H3BS24 57 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 CDC42EP2O14613 210 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 EEF1E1O43324 174 aaKnown RBP10.78□□□□□ -0.68
UPF3A-210ENST00000493727 CXCL13O43927 109 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 MITFO75030 526 aaPredicted RBP10.78□□□□□ -0.68
UPF3A-210ENST00000493727 SOX14O95416 240 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 SYNGR4O95473 234 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 PMS2P2O95744 297 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 ALPLP05186 524 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 TMIGD3P0DMS9 266 aaPredicted RBP10.78□□□□□ -0.68
UPF3A-210ENST00000493727 ZNF708P17019 499 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 POU1F1P28069 291 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 TPD52P55327 224 aaPredicted RBP10.78□□□□□ -0.68
UPF3A-210ENST00000493727 CLDN18P56856 261 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 CARD18P57730 90 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 COX10Q12887 443 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 PMS2P3Q13401 168 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 RFX4Q33E94 735 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 KDM4DQ6B0I6 523 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 KLHL17Q6TDP4 642 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 RASSF6Q6ZTQ3 369 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 THAP5Q7Z6K1 395 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 GGNQ86UU5 652 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 CDC20BQ86Y33 519 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 OR52L1Q8NGH7 329 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 OR5J2Q8NH18 312 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 OR51A7Q8NH64 312 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 OR10D3Q8NH80 312 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 TEX47Q8TBZ9 253 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 OSTF1Q92882 214 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 GPA33Q99795 319 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 NAA11Q9BSU3 229 aaPredicted RBP10.78□□□□□ -0.68
UPF3A-210ENST00000493727 TBC1D23Q9NUY8 699 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 SMPD3Q9NY59 655 aaPredicted RBP10.78□□□□□ -0.68
UPF3A-210ENST00000493727 JKAMPQ9P055 326 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 TRAPPC4Q9Y296 219 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 CDH10Q9Y6N8 788 aa10.78□□□□□ -0.68
UPF3A-210ENST00000493727 STAB1Q9NY15 2570 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms