RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 FBXW9Q5XUX1 488 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 VWA1Q6PCB0 445 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 TFAP2EQ6VUC0 442 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 BEND4Q6ZU67 534 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 MRGPRGQ86SM5 289 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 CCDC71Q8IV32 467 aaPredicted RBP10.23□□□□□ -0.77
LSM2-214ENST00000493387 TMEM123Q8N131 208 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 GPR137CQ8N3F9 429 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 ZNF808Q8N4W9 903 aaPredicted RBP10.23□□□□□ -0.77
LSM2-214ENST00000493387 ZNF555Q8NEP9 628 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 OR6N1Q8NGY5 312 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 LILRB4Q8NHJ6 448 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 TSPAN32Q96QS1 320 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 EMC6Q9BV81 110 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 MRPL13Q9BYD1 178 aaKnown RBP10.23□□□□□ -0.77
LSM2-214ENST00000493387 TOR3AQ9H497 397 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 C12orf49Q9H741 205 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 ADAM18Q9Y3Q7 739 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 ALPK2Q86TB3 2170 aa10.23□□□□□ -0.77
LSM2-214ENST00000493387 TEX13CA0A0J9YWL9 993 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 PRSS37A4D1T9 235 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 M0R3G1 203 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 ARHGEF9O43307 516 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 SNAP29O95721 258 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 PGA4P0DJD7 388 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 PGA3P0DJD8 388 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 HIST1H1CP16403 213 aaKnown RBP10.22□□□□□ -0.77
LSM2-214ENST00000493387 ZNF3P17036 446 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 BMP5P22003 454 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 NTF4P34130 210 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 VHLP40337 213 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 PCYT1AP49585 367 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 SNCBQ16143 134 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 ZIK1Q3SY52 487 aaPredicted RBP10.22□□□□□ -0.77
LSM2-214ENST00000493387 THEM4Q5T1C6 240 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 SLX4IPQ5VYV7 408 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 TTC23Q5W5X9 447 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 CARD17Q5XLA6 110 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 FBXW10Q5XX13 1052 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 UBE2J2Q8N2K1 259 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 DHRSXQ8N5I4 330 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 NOXO1Q8NFA2 376 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 OR4Q3Q8NH05 313 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 CA5BP1Q8WTZ4 195 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 NRG4Q8WWG1 115 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 HDAC2Q92769 488 aaKnown RBP10.22□□□□□ -0.77
LSM2-214ENST00000493387 TMEM54Q969K7 222 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 RASD2Q96D21 266 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 PLEKHA8Q96JA3 519 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 HRASLS5Q96KN8 279 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 KCNK17Q96T54 332 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 GRIP2Q9C0E4 1043 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 CMC2Q9NRP2 79 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 ASB6Q9NWX5 421 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 ELOVL5Q9NYP7 299 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 GLTPQ9NZD2 209 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 VSX1Q9NZR4 365 aaPredicted RBP10.22□□□□□ -0.77
LSM2-214ENST00000493387 MALT1Q9UDY8 824 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 FOXD3Q9UJU5 478 aaPredicted RBP10.22□□□□□ -0.77
LSM2-214ENST00000493387 INTS1Q8N201 2190 aaKnown RBP10.22□□□□□ -0.77
LSM2-214ENST00000493387 BOD1L1Q8NFC6 3051 aa10.22□□□□□ -0.77
LSM2-214ENST00000493387 DIDO1Q9BTC0 2240 aaKnown RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 PCNX1Q96RV3 2341 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 A8MXE2 369 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 EEF1E1-BLOC1S5C9J1V9 151 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 ZNF587BE7ETH6 402 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 RPL36A-HNRNPH2H7BZ11 118 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 SLC16A6O15403 523 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 EEF1E1O43324 174 aaKnown RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 PAICSP22234 425 aaKnown RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 CRABP1P29762 137 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 HSPA13P48723 471 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 ASCL1P50553 236 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 SH3BGRP55822 239 aaPredicted RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 CDC42P60953 191 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 TGFBR3Q03167 851 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.21□□□□□ -0.77
LSM2-214ENST00000493387 CD47Q08722 323 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 P2RY6Q15077 328 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 SNAPC1Q16533 368 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 HIST3H3Q16695 136 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 MESTQ5EB52 335 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 SLC35F1Q5T1Q4 408 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 TSPO2Q5TGU0 170 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 C12orf73Q69YU5 71 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 ACSM5Q6NUN0 579 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 DNM1P34Q6PK57 102 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 Q6ZT83 130 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 NCCRP1Q6ZVX7 275 aaPredicted RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 LIX1LQ8IVB5 337 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 DEPDC4Q8N2C3 294 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 IQCF1Q8N6M8 205 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 ZNF610Q8N9Z0 462 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 OR52E2Q8NGJ4 325 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 OR4K13Q8NH42 304 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 TRUB1Q8WWH5 349 aaKnown RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.77
LSM2-214ENST00000493387 HDHD5Q9BXW7 423 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 ULBP2Q9BZM5 246 aa10.21□□□□□ -0.77
LSM2-214ENST00000493387 FN3KQ9H479 309 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms