RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PCMT1P22061 227 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 PCGF2P35227 344 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 PTDSS1P48651 473 aaKnown RBP10.76□□□□□ -0.69
COL6A1-205ENST00000492851 BIDP55957 195 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 MTPNP58546 118 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 SELENOVP59797 346 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF74Q16587 644 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 VMACQ2NL98 169 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 COQ5Q5HYK3 327 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 KRT80Q6KB66 452 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 SLC35D2Q76EJ3 337 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 CCDC80Q76M96 950 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM54Q969K7 222 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
COL6A1-205ENST00000492851 BPESC1Q9GZL8 116 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 C1orf198Q9H425 327 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF385DQ9H6B1 395 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 SEC61A2Q9H9S3 476 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 TAS2R5Q9NYW4 299 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 GLTPQ9NZD2 209 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 STX18Q9P2W9 335 aaKnown RBP10.76□□□□□ -0.69
COL6A1-205ENST00000492851 REV1Q9UBZ9 1251 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 SLC7A8Q9UHI5 535 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 BAG5Q9UL15 447 aa10.76□□□□□ -0.69
COL6A1-205ENST00000492851 FBN1P35555 2871 aaKnown RBP10.76□□□□□ -0.69
COL6A1-205ENST00000492851 CR1P17927 2039 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 IGHV4-61A0A0C4DH41 118 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 A0A0G2JND7 137 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SH3PXD2BA1X283 911 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 HTR3EA5X5Y0 456 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF503-AS2A6NEH8 195 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 LRRN3E7EW58 273 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 C11orf98E9PRG8 122 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 M0R233 179 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 PHF1O43189 567 aaPredicted RBP10.75□□□□□ -0.69
COL6A1-205ENST00000492851 EDF1O60869 148 aaKnown RBP10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SERPINI2O75830 405 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SEC14L2O76054 403 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 BCL10O95999 233 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 IGF2P01344 180 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SERPINA5P05154 406 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ADRA2AP08913 450 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 UMPSP11172 480 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 B4GALT1P15291 398 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 RBM34P42696 430 aaKnown RBP10.75□□□□□ -0.69
COL6A1-205ENST00000492851 GIPRP48546 466 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 MOGQ16653 247 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SLC36A2Q495M3 483 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 FAM120AOSQ5T036 256 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM53Q6P2H8 277 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ERICH5Q6P6B1 374 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 RETREG3Q86VR2 466 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 LSRQ86X29 649 aaPredicted RBP10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SLC22A24Q8N4F4 322 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 GPR32P1Q8NGA4 272 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 OR1J2Q8NGS2 313 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 OR10A6Q8NH74 314 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF75AQ96N20 296 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ECSITQ9BQ95 431 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 WFDC6Q9BQY6 131 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF426Q9BUY5 554 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 LRMDAQ9H2I8 198 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 NPHS2Q9NP85 383 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF346Q9UL40 294 aaKnown RBP10.75□□□□□ -0.69
COL6A1-205ENST00000492851 SLC7A7Q9UM01 511 aa10.75□□□□□ -0.69
COL6A1-205ENST00000492851 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 A0A1W2PRG6 482 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 DHHO43323 396 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 IGHG1P01857 330 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 MT-ND1P03886 318 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 OPN1SWP03999 348 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 ASAH2BP0C7U1 165 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 THRBP10828 461 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 NR2C1P13056 603 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 IFNA8P32881 189 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 ZNF84P51523 738 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM33P57088 247 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 MRPS11P82912 194 aaKnown RBP10.74□□□□□ -0.69
COL6A1-205ENST00000492851 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 MMEL1Q495T6 779 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 NANOGP8Q6NSW7 305 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 NANOGNBQ7Z5D8 188 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 MYPOPQ86VE0 399 aaPredicted RBP10.74□□□□□ -0.69
COL6A1-205ENST00000492851 SKA3Q8IX90 412 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 LINC01356Q8N9X3 169 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 OR8J3Q8NGG0 315 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 VANGL1Q8TAA9 524 aaPredicted RBP10.74□□□□□ -0.69
COL6A1-205ENST00000492851 KCNN2Q9H2S1 579 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 HEATR1Q9H583 2144 aaKnown RBP10.74□□□□□ -0.69
COL6A1-205ENST00000492851 CHODLQ9H9P2 273 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 NANOGQ9H9S0 305 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 TMEM38BQ9NVV0 291 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 COL6A5A8TX70 2615 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 ATRQ13535 2644 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 ABCA1O95477 2261 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 PLCE1Q9P212 2302 aa10.74□□□□□ -0.69
COL6A1-205ENST00000492851 BBIP1A8MTZ0 92 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 BLOC1S5-TXNDC5H3BN57 136 aa10.73□□□□□ -0.69
COL6A1-205ENST00000492851 OR5F1O95221 314 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms