RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 AANATQ16613 207 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 TIGD6Q17RP2 521 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 SLC35F1Q5T1Q4 408 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 NXNL2Q5VZ03 156 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 PLET1Q6UQ28 207 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 APOOLQ6UXV4 268 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 MARCH3Q86UD3 253 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 GABRG1Q8N1C3 465 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 YIPF7Q8N8F6 280 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 OR4F6Q8NGB9 312 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 OR10D3Q8NH80 312 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 SGCDQ92629 289 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 SLC47A1Q96FL8 570 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 NPAS1Q99742 590 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 FAIM2Q9BWQ8 316 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 PIGUQ9H490 435 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 ELOVL6Q9H5J4 265 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 PTGES2Q9H7Z7 377 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 BRF2Q9HAW0 419 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 LRTM1Q9HBL6 345 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 TMEM160Q9NX00 188 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 FAM120CQ9NX05 1096 aaKnown RBP11.64□□□□□ -0.55
HDAC3-213ENST00000492506 KIF25Q9UIL4 384 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 GMPPBQ9Y5P6 360 aa11.64□□□□□ -0.55
HDAC3-213ENST00000492506 TENM1Q9UKZ4 2725 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 IQCMA0A1B0GVH7 501 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 A8MT66 165 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 PPP6CO00743 305 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 ADAMDEC1O15204 470 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 GSTA4O15217 222 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 ORC5O43913 435 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 SLC43A1O75387 559 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 SEC22BO75396 215 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 PLGP00747 810 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-213ENST00000492506 CD3EP07766 207 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 AGTR1P30556 359 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 MAP2K4P45985 399 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 DGCR6Q14129 220 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 TMEM249Q2WGJ8 235 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 VPS26BQ4G0F5 336 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 ALKBH2Q6NS38 261 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 RRM2BQ7LG56 351 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 GALNT10Q86SR1 603 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 COMMD7Q86VX2 200 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 STEAP2Q8NFT2 490 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 OR10H5Q8NGA6 315 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 OR8H1Q8NGG4 311 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 FAM110BQ8TC76 370 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 DACT3Q96B18 629 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-213ENST00000492506 PHF21BQ96EK2 531 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 TRNT1Q96Q11 434 aaKnown RBP11.63□□□□□ -0.55
HDAC3-213ENST00000492506 HBEGFQ99075 208 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 SDHCQ99643 169 aaPredicted RBP11.63□□□□□ -0.55
HDAC3-213ENST00000492506 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 PRRG4Q9BZD6 226 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 TRIM2Q9C040 744 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 ESRP2Q9H6T0 727 aaKnown RBP11.63□□□□□ -0.55
HDAC3-213ENST00000492506 AKTIPQ9H8T0 292 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 FANCFQ9NPI8 374 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 IFT46Q9NQC8 304 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 GLRX2Q9NS18 164 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 AIG1Q9NVV5 245 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 NUFIP1Q9UHK0 495 aaKnown RBP11.63□□□□□ -0.55
HDAC3-213ENST00000492506 ZNF225Q9UK10 706 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 OR10H1Q9Y4A9 318 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
HDAC3-213ENST00000492506 DPRXA6NFQ7 191 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 TMEM233B4DJY2 109 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 MYL12BO14950 172 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 AZIN1O14977 448 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 CXCL13O43927 109 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SSX4O60224 188 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 ECDO95905 644 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 IL3P08700 152 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 MYL12AP19105 171 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 GADD45AP24522 165 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 ADH6P28332 368 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 THBS2P35442 1172 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 BTG1P62324 171 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 RAE1P78406 368 aaKnown RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 CSTF3Q12996 717 aaKnown RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 PRSS53Q2L4Q9 553 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 CYP27C1Q4G0S4 372 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SFRP5Q5T4F7 317 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 LCN1P1Q5VSP4 162 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 KANK2Q63ZY3 851 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 FIGNL1Q6PIW4 674 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 METAP1DQ6UB28 335 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 RPS27LQ71UM5 84 aaKnown RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 DTX2Q86UW9 622 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SAMD14Q8IZD0 417 aaPredicted RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 OR9I1Q8NGQ6 314 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 FANK1Q8TC84 345 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 SELENOMQ8WWX9 145 aa11.62□□□□□ -0.55
HDAC3-213ENST00000492506 EXOSC8Q96B26 276 aaKnown RBP11.62□□□□□ -0.55
HDAC3-213ENST00000492506 HS6ST2Q96MM7 605 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms