RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	ZBED5	Q49AG3	693 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	HIKESHI	Q53FT3	197 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	PHYHD1	Q5SRE7	291 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	FAM205BP	Q63HN1	556 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	PGM2L1	Q6PCE3	622 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	PAMR1	Q6UXH9	720 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	ZNF704	Q6ZNC4	412 aa	Predicted RBP	12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	AQP12A	Q8IXF9	295 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	CCDC36	Q8IYA8	594 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	OR4K5	Q8NGD3	323 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	TMEM54	Q969K7	222 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	FAM46A	Q96IP4	442 aa	Known RBP	12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	RADIL	Q96JH8	1075 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	TNFRSF13C	Q96RJ3	184 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	FUZ	Q9BT04	418 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	MMADHC	Q9H3L0	296 aa	Predicted RBP	12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	TXNIP	Q9H3M7	391 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	MGAT4B	Q9UQ53	548 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	AURKC	Q9UQB9	309 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	POFUT2	Q9Y2G5	429 aa		12.1	□□□□□ -0.47
PTPN7-215	ENST00000492451	PRR14L	Q5THK1	2151 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ALPK2	Q86TB3	2170 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	TRAV27	A0A087WT01	109 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451		A0A1W2PPR1	153 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451		A0A1W2PR80	420 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	DPRX	A6NFQ7	191 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	GSC2	O15499	205 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	PGA4	P0DJD7	388 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	PGA3	P0DJD8	388 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ACADS	P16219	412 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	OMP	P47874	163 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	IST1	P53990	364 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	RPL27	P61353	136 aa	Known RBP	12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	BSPH1	Q075Z2	132 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	KEAP1	Q14145	624 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	SEC23B	Q15437	767 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ARMC4	Q5T2S8	1044 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ADAM5	Q6NVV9	412 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	C20orf204	Q6ZNR8	217 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ZNF627	Q7L945	461 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	MEX3D	Q86XN8	651 aa	Known RBP	12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	LINC00471	Q8N535	108 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	OR13C2	Q8NGS9	318 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ASB10	Q8WXI3	467 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	ALPK1	Q96QP1	1244 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	NPAP1	Q9NZP6	1156 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451	AKAP6	Q13023	2319 aa		12.09	□□□□□ -0.47
PTPN7-215	ENST00000492451		A0A096LPE4	126 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451		A0A1W2PPZ6	126 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451		A6NIZ1	184 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451		M0R1B8	84 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	CDC42EP2	O14613	210 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	IGHM	P01871	453 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	RAP2A	P10114	183 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	RPL4	P36578	427 aa	Known RBP	12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	LIMS1	P48059	325 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	HMGA2	P52926	109 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	CTXN1	P60606	82 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	RAP1B	P61224	184 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	RAP1A	P62834	184 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	FHL1	Q13642	323 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	FLOT2	Q14254	428 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	HIST3H3	Q16695	136 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	C3orf36	Q3SXR2	165 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	SPNS3	Q6ZMD2	512 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	WDFY1	Q8IWB7	410 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	DEPDC4	Q8N2C3	294 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	FAM169B	Q8N8A8	192 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	NOXO1	Q8NFA2	376 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	FNDC8	Q8TC99	324 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF837	Q96EG3	531 aa	Predicted RBP	12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	MRPL13	Q9BYD1	178 aa	Known RBP	12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	UBTD1	Q9HAC8	227 aa		12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.08	□□□□□ -0.48
PTPN7-215	ENST00000492451	DHRS12	A0PJE2	317 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	UNC119B	A6NIH7	251 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	TNFRSF11B	O00300	401 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ABCD4	O14678	606 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	HS3ST1	O14792	307 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	DHH	O43323	396 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	OR10H3	O60404	316 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	TRMU	O75648	421 aa	Known RBP	12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	NDUFB2	O95178	105 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	QDPR	P09417	244 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	CD40	P25942	277 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF84	P51523	738 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ART1	P52961	327 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	GK3P	Q14409	553 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	OR2T5	Q6IEZ7	315 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	LRFN4	Q6PJG9	635 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF813	Q6ZN06	617 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	SPATA24	Q86W54	205 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ZNF611	Q8N823	705 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	LRRC75A	Q8NAA5	344 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	OR2T29	Q8NH02	315 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	NANOS1	Q8WY41	292 aa	Known RBP	12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	MBD6	Q96DN6	1003 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	RSRC1	Q96IZ7	334 aa	Known RBP	12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	FOXB1	Q99853	325 aa		12.07	□□□□□ -0.48
PTPN7-215	ENST00000492451	ALG12	Q9BV10	488 aa		12.07	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms