RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 GPA33Q99795 319 aa13.21□□□□□ -0.29
CDC42SE1-205ENST00000491825 TMEM204Q9BSN7 226 aa13.21□□□□□ -0.29
CDC42SE1-205ENST00000491825 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.29
CDC42SE1-205ENST00000491825 NDEL1Q9GZM8 345 aa13.21□□□□□ -0.29
CDC42SE1-205ENST00000491825 SIGLEC7Q9Y286 467 aa13.21□□□□□ -0.29
CDC42SE1-205ENST00000491825 FREM1Q5H8C1 2179 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 TRIM64A6NGJ6 449 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 TRIM64BA6NI03 449 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 FAM171A2A8MVW0 826 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 C11orf98E9PRG8 122 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 PLAUP00749 431 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 IGHMP01871 453 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 PAX1P15863 534 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 PSMB1P20618 241 aaKnown RBP13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 COX5AP20674 150 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 SELENOPP49908 381 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 DAP3P51398 398 aaKnown RBP13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 CLDN17P56750 224 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 TSPAN31Q12999 210 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 P2RY6Q15077 328 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 TAF11Q15544 211 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 FBXW9Q5XUX1 488 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 ZNF704Q6ZNC4 412 aaPredicted RBP13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 HDDC2Q7Z4H3 204 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 TMEM123Q8N131 208 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 LRRC75AQ8NAA5 344 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 POMGNT2Q8NAT1 580 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 MOSPD2Q8NHP6 518 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 GNPDA2Q8TDQ7 276 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 NRBF2Q96F24 287 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 OR2M2Q96R28 347 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 GPX7Q96SL4 187 aaPredicted RBP13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 LINC00470Q9BZP3 86 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 ACTR6Q9GZN1 396 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 OR10A4Q9H209 315 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 SLCO5A1Q9H2Y9 848 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 NTN4Q9HB63 628 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
CDC42SE1-205ENST00000491825 ZANQ9Y493 2812 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 A0A1W2PRG6 482 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 UNC119BA6NIH7 251 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 CENPBD1B2RD01 187 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 H3BNX3 289 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 PTP4A3O75365 173 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 E2F6O75461 281 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 ADAP00813 363 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 IFNGR1P15260 489 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 ZNF26P17031 533 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 PTH2RP49190 550 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 PPP1R8Q12972 351 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 RPL13AP3Q6NVV1 102 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 NIPAL3Q6P499 406 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 SHQ1Q6PI26 577 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 SLC35D2Q76EJ3 337 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 OR10G2Q8NGC3 310 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 OR51A7Q8NH64 312 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 OR6X1Q8NH79 312 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 PYDC1Q8WXC3 89 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 LRR1Q96L50 414 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 TNFRSF13CQ96RJ3 184 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 MED29Q9NX70 200 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 STX18Q9P2W9 335 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 PRSS50Q9UI38 385 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 MGAT4BQ9UQ53 548 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 GPR52Q9Y2T5 361 aa13.19□□□□□ -0.3
CDC42SE1-205ENST00000491825 ARID1AO14497 2285 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 SLC35F4A4IF30 521 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 PDLIM1O00151 329 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ENTPD5O75356 428 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 SLC43A1O75387 559 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 NDUFB2O95178 105 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 F13BP05160 661 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 GSTM3P21266 225 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ARHGDIAP52565 204 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 NR1H2P55055 460 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 FXYD6P3P58550 94 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 TSPO2Q5TGU0 170 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ZNF620Q6ZNG0 422 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ABHD12BQ7Z5M8 362 aaPredicted RBP13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 TMEM179BQ7Z7N9 219 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 CLDN22Q8N7P3 220 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 PLPPR2Q96GM1 343 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 TXNIPQ9H3M7 391 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 SLC7A10Q9NS82 523 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ASB6Q9NWX5 421 aa13.18□□□□□ -0.3
CDC42SE1-205ENST00000491825 ROS1P08922 2347 aa13.17□□□□□ -0.3
CDC42SE1-205ENST00000491825 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
CDC42SE1-205ENST00000491825 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms