RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 RPH3AQ9Y2J0 694 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-208ENST00000490993 OR2W5A6NFC9 320 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 PTP4A3O75365 173 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 WNT1P04628 370 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 ELK1P19419 428 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 BCKDHBP21953 392 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 ACHEP22303 614 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 HOXC12P31275 282 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 HOXD12P35452 270 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 BIDP55957 195 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 SMCO1Q147U7 214 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 UTS2BQ765I0 119 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 GDPD3Q7L5L3 318 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 CADM3Q8N126 398 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 OR4M1Q8NGD0 313 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 TMEM106AQ96A25 262 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 ZBTB8AQ96BR9 441 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 SLC25A44Q96H78 314 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-208ENST00000490993 CDX2Q99626 313 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-208ENST00000490993 CTRCQ99895 268 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 SEMA4CQ9C0C4 833 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 SLA2Q9H6Q3 261 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 HIF3AQ9Y2N7 669 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 MEMO1Q9Y316 297 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 A0A1B0GTQ1 180 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 FAM25EA8MYX2 175 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 AKAIN1P0CW23 69 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 ITGA3P26006 1051 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 ACAA2P42765 397 aaKnown RBP6.68□□□□□ -1.34
NPHP3-208ENST00000490993 TATDN3Q17R31 274 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 THEM4Q5T1C6 240 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 THSD4Q6ZMP0 1018 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 NOXA1Q86UR1 476 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 GLB1L2Q8IW92 636 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 DNASE2BQ8WZ79 361 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 EMC3Q9P0I2 261 aa6.68□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF223Q9UK11 482 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-208ENST00000490993 PRR19A6NJB7 356 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 AIPO00170 330 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 MEN1O00255 615 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 SCGB2B2Q4G0G5 96 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 CDONQ4KMG0 1287 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 GUSBP11Q6P575 273 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 C6orf15Q6UXA7 325 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 RPS19BP1Q86WX3 136 aaKnown RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 UBQLNLQ8IYU4 475 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF679Q8IYX0 411 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 IL22RA1Q8N6P7 574 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 OR56B4Q8NH76 319 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 FLVCR1-AS1Q8TAF5 88 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 KTI12Q96EK9 354 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 WDR77Q9BQA1 342 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 CST11Q9H112 138 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 LDAHQ9H6V9 325 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF160Q9HCG1 818 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 NUFIP1Q9UHK0 495 aaKnown RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 SLC7A11Q9UPY5 501 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PLXNA2O75051 1894 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 A8MV72 311 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 INHBBP09529 407 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 HLA-DMAP28067 261 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PCBD1P61457 104 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PLP2Q04941 152 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 MGAT2Q10469 447 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 SKP2Q13309 424 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 MELKQ14680 651 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PCGF3Q3KNV8 242 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 P4HA3Q7Z4N8 544 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PLCZ1Q86YW0 608 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF615Q8N8J6 731 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 CHIAQ9BZP6 476 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 OR51J1Q9H342 316 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 MOB1AQ9H8S9 216 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 NUDT15Q9NV35 164 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 F5P12259 2224 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 TRABD2BA6NFA1 517 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 H3BUI4 141 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 GPR171O14626 319 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 CD3GP09693 182 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 CLUP10909 449 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 IFNGR1P15260 489 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 DDOSTP39656 456 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 GALK2Q01415 458 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 MEF2DQ14814 521 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 TOMM34Q15785 309 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 AWAT2Q6E213 333 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 LAIR1Q6GTX8 287 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 TCEAL6Q6IPX3 200 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 WDR5BQ86VZ2 330 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 TAAR8Q969N4 342 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 SNX18Q96RF0 628 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PDCD1LG2Q9BQ51 273 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 RBM24Q9BX46 236 aaKnown RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 PISDQ9UG56 409 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 B9D1Q9UPM9 204 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 COA3Q9Y2R0 106 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-208ENST00000490993 HDGFL3Q9Y3E1 203 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 CHST2Q9Y4C5 530 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 LOC102725191A0A1B0GVB3 256 aa6.67□□□□□ -1.34
NPHP3-208ENST00000490993 TRIM64BA6NI03 449 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms