RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 RAB19A4D1S5 217 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OR2F2O95006 317 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 ANXA2P07355 339 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OR4E1P0C645 316 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 SPI1P17947 270 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 ADCYAP1P18509 176 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 AKR1C2P52895 323 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 AKR1C1Q04828 323 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OR2F1Q13607 317 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 TRMT12Q53H54 448 aaKnown RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF227Q86WZ6 799 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OR8S1Q8NH09 359 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 DVL3Q92997 716 aaPredicted RBP17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OBP2AQ9NY56 170 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 OR10H1Q9Y4A9 318 aa17.62■□□□□ 0.41
SNAPC3-206ENST00000490969 KAT7O95251 611 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 MAS1P04201 325 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 ITGB2P05107 769 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 CSRP1P21291 193 aaKnown RBP17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 BDKRB2P30411 391 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 IRF4Q15306 451 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 ANKRD16Q6P6B7 361 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 FIGNL1Q6PIW4 674 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 ADAMTSL4Q6UY14 1074 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 LINC00469Q8N7U9 141 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 COX18Q8N8Q8 333 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 OR2L8Q8NGY9 312 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 ZPLD1Q8TCW7 415 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 PTCHD1Q96NR3 888 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF426Q9BUY5 554 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 CTAG2O75638 210 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 PCCBP05166 539 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 VASPP50552 380 aaPredicted RBP17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 EFNB2P52799 333 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 BEX5Q5H9J7 111 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 ZNF684Q5T5D7 378 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 NPEPL1Q8NDH3 523 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 OR2L3Q8NG85 312 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 OR5AK2Q8NH90 309 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 Q96M85 177 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 TICRRQ7Z2Z1 1910 aa17.61■□□□□ 0.41
SNAPC3-206ENST00000490969 OR14I1A6ND48 311 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 CDK3Q00526 305 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 DHRS7BQ6IAN0 325 aaPredicted RBP17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 STEAP1BQ6NZ63 245 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 SPAG16Q8N0X2 631 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 OR4K14Q8NGD5 310 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 ASF1BQ9NVP2 202 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 STEAP1Q9UHE8 339 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 ENTPD2Q9Y5L3 495 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 TRAV8-7A0A075B6U6 113 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 TRAV18A0A075B6X5 111 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 OR6C68A6NDL8 312 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 VCANP13611 3396 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 SCAND1P57086 179 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 SLC35D3Q5M8T2 416 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 NKAIN2Q5VXU1 208 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 SLC6A19Q695T7 634 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 C11orf87Q6NUJ2 197 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 YAF2Q8IY57 180 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 MFSD9Q8NBP5 474 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 CLEC1AQ8NC01 280 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 OR5M8Q8NGP6 311 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 EPHA6Q9UF33 1036 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 FBXL21Q9UKT6 434 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 USP34Q70CQ2 3546 aa17.6■□□□□ 0.41
SNAPC3-206ENST00000490969 TRBV5-5A0A0J9YX44 114 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 TMEM82A0PJX8 343 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 OR8G3PP0DMU2 310 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 RPL4P36578 427 aaKnown RBP17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 RBM34P42696 430 aaKnown RBP17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 TMEM52BQ4KMG9 183 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 TMED4Q7Z7H5 227 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 EDAQ92838 391 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 UPB1Q9UBR1 384 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 A0A1B0GTI1 187 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 EDDM13A0A1B0GTR0 161 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 RNF222A6NCQ9 220 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 SLC25A4P12235 298 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 PRSS3P35030 304 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 SEC13P55735 322 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 SNRPNP63162 240 aaKnown RBP17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 DCDP81605 110 aaKnown RBP17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 ALKBH1Q13686 389 aaKnown RBP17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 ALG10BQ5I7T1 473 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 WNT2BQ93097 391 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 FRRS1LQ9P0K9 344 aa17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 C19orf53Q9UNZ5 99 aaPredicted RBP17.59■□□□□ 0.41
SNAPC3-206ENST00000490969 FAM171A2A8MVW0 826 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 LATO43561 262 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 MELTFP08582 738 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 SPP1P10451 314 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 DLSTP36957 453 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 PSMD4P55036 377 aaKnown RBP17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 TAF13Q15543 124 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 LRRC37A5PQ49AS3 106 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 FAM220AQ7Z4H9 259 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 SAMD14Q8IZD0 417 aaPredicted RBP17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 OR51D1Q8NGF3 324 aa17.58■□□□□ 0.41
SNAPC3-206ENST00000490969 GLYATL2Q8WU03 294 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms