RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FUT4P22083 530 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 USF1P22415 310 aaPredicted RBP9.04□□□□□ -0.96
TTC28-207ENST00000490475 GZMKP49863 264 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 PDLIM4P50479 330 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 C9orf135Q5VTT2 229 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 ANKRD16Q6P6B7 361 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 UGT2A3Q6UWM9 527 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 C16orf89Q6UX73 402 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 RINLQ6ZS11 566 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 CREB3L2Q70SY1 520 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 FKBP9P1Q75LS8 142 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 CBLL1Q75N03 491 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 NKAIN4Q8IVV8 208 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 PGAM4Q8N0Y7 254 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 RBM15BQ8NDT2 890 aaKnown RBP9.04□□□□□ -0.96
TTC28-207ENST00000490475 C10orf105Q8TEF2 133 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 ZFAND2BQ8WV99 257 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 FAM162AQ96A26 154 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 SLC41A3Q96GZ6 507 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 SLC38A2Q96QD8 506 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 KCNK17Q96T54 332 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 PIMREGQ9BSJ6 248 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 BEX2Q9BXY8 128 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 PCDHAC1Q9H158 963 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 TAS2R1Q9NYW7 299 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 RIMS3Q9UJD0 308 aa9.04□□□□□ -0.96
TTC28-207ENST00000490475 LOC390937A0A1W2PQ73 354 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 MAGEA13PA6NCF6 341 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 RNF212BA8MTL3 300 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 MS4A18H0YCH9 400 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 RPL36A-HNRNPH2H7BZ11 118 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 J3KTA2 159 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 M0R082 166 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 CHP2O43745 196 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 SLC43A1O75387 559 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 BGLAPP02818 100 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 HSD17B1P14061 328 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 CDH2P19022 906 aaPredicted RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 HNF1AP20823 631 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 GRPRP30550 384 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 SERPINF1P36955 418 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 TAS2R41P59536 307 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 LSM11P83369 360 aaKnown RBP eCLIP9.03□□□□□ -0.96
TTC28-207ENST00000490475 SPOCK1Q08629 439 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 SWI5Q1ZZU3 235 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 MS4A18Q3C1V0 323 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 TBRG1Q3YBR2 411 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 SAMD4BQ5PRF9 694 aaKnown RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 FAM69AQ5T7M9 428 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 NIPAL3Q6P499 406 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 TTC33Q6PID6 262 aaPredicted RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 B3GLCTQ6Y288 498 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 H1FNTQ75WM6 255 aaPredicted RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 TSEN54Q7Z6J9 526 aaKnown RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 EGFL6Q8IUX8 553 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 C10orf53Q8N6V4 93 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 ZNF525Q8N782 197 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 OR1K1Q8NGR3 316 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 ZNF417Q8TAU3 575 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 LZICQ8WZA0 190 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 HSH2DQ96JZ2 352 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 OXGR1Q96P68 337 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 MOGAT1Q96PD6 335 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 ZNF385AQ96PM9 386 aaKnown RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 ZNF587Q96SQ5 575 aaPredicted RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 EPYCQ99645 322 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 PRSS27Q9BQR3 290 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 TMEM43Q9BTV4 400 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 C1QTNF6Q9BXI9 259 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 SHARPINQ9H0F6 387 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 RAB1BQ9H0U4 201 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 DCAF13Q9NV06 445 aaKnown RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 RHCGQ9UBD6 479 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 CRNNQ9UBG3 495 aaPredicted RBP9.03□□□□□ -0.96
TTC28-207ENST00000490475 SCOCQ9UIL1 159 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 MOKQ9UQ07 419 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 FBN3Q75N90 2809 aa9.03□□□□□ -0.96
TTC28-207ENST00000490475 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.96
TTC28-207ENST00000490475 A0A096LNT2 108 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 LOC102725191A0A1B0GVB3 256 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 ATP6V1G2-DDX39BF2Z307 99 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 KPNA4O00629 521 aaPredicted RBP9.02□□□□□ -0.97
TTC28-207ENST00000490475 FFAR1O14842 300 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 ENTPD5O75356 428 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 GMNNO75496 209 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 OR5F1O95221 314 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 CH25HO95992 272 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 HPRP00739 348 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 IFNW1P05000 195 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 ARR3P36575 388 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 PPOXP50336 477 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 FOXG1P55316 489 aaPredicted RBP9.02□□□□□ -0.97
TTC28-207ENST00000490475 ACTR3P61158 418 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 C1DQ13901 141 aaKnown RBP9.02□□□□□ -0.97
TTC28-207ENST00000490475 EFNB3Q15768 340 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 FAM166AQ6J272 317 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 SLC46A3Q7Z3Q1 461 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 EPHX4Q8IUS5 362 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 GPR137CQ8N3F9 429 aa9.02□□□□□ -0.97
TTC28-207ENST00000490475 LRRC17Q8N6Y2 441 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms