RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PRDX6P30041 224 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 LSP1P33241 339 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 RAB35Q15286 201 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 GSG1Q2KHT4 349 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 OR4F15Q8NGB8 312 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 HTRA1Q92743 480 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 KCTD14Q9BQ13 255 aaPredicted RBP17.15■□□□□ 0.34
SMC4-222ENST00000490207 NOX3Q9HBY0 568 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 B3GNT2Q9NY97 397 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 ABCD2Q9UBJ2 740 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 PMF1-BGLAPU3KQ54 211 aa17.15■□□□□ 0.34
SMC4-222ENST00000490207 NSD1Q96L73 2696 aaPredicted RBP17.15■□□□□ 0.34
SMC4-222ENST00000490207 ARFGEF3Q5TH69 2177 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 IGHV2OR16-5A0A0B4J2B6 119 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 A0A1W2PRG6 482 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 PDE5AO76074 875 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 IGHG1P01857 330 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 F13BP05160 661 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 PGA4P0DJD7 388 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 PGA3P0DJD8 388 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 YAP1P46937 504 aaKnown RBP17.14■□□□□ 0.33
SMC4-222ENST00000490207 PSME3P61289 254 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 SNRPD2P62316 118 aaKnown RBP17.14■□□□□ 0.33
SMC4-222ENST00000490207 IFI44LQ53G44 452 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 VHLLQ6RSH7 139 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 CBLL1Q75N03 491 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 HDDC2Q7Z4H3 204 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 CPLX4Q7Z7G2 160 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 OFCC1Q8IZS5 231 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 MAPK1IP1LQ8NDC0 245 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 NOXO1Q8NFA2 376 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 NUP37Q8NFH4 326 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 LIPHQ8WWY8 451 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 ASB10Q8WXI3 467 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 FAM162AQ96A26 154 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 HSH2DQ96JZ2 352 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 REG4Q9BYZ8 158 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 INIPQ9NRY2 104 aa17.14■□□□□ 0.33
SMC4-222ENST00000490207 ZANQ9Y493 2812 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 J3KTA2 159 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 SERPINA1P01009 418 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 AQP2P41181 271 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 DAP3P51398 398 aaKnown RBP17.13■□□□□ 0.33
SMC4-222ENST00000490207 CLRN1P58418 232 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 SWI5Q1ZZU3 235 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 CLEC2AQ6UVW9 174 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 FNDC11Q9BVV2 318 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 ZNF224Q9NZL3 707 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 SNX13Q9Y5W8 968 aa17.13■□□□□ 0.33
SMC4-222ENST00000490207 NIPBLQ6KC79 2804 aaeCLIP17.13■□□□□ 0.33
SMC4-222ENST00000490207 GMNCA6NCL1 334 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 UBL3O95164 117 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 RAB36O95755 333 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 IFI30P13284 250 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 NCK1P16333 377 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 SERPINF1P36955 418 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 PTDSS1P48651 473 aaKnown RBP17.12■□□□□ 0.33
SMC4-222ENST00000490207 GNGT1P63211 74 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 HGFACQ04756 655 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 PIGFQ07326 219 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 TRAM2Q15035 370 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 ADIPOQQ15848 244 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 MST1LQ2TV78 715 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 FKBP9P1Q75LS8 142 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 PIWIL3Q7Z3Z3 882 aaKnown RBP17.12■□□□□ 0.33
SMC4-222ENST00000490207 IL17RDQ8NFM7 739 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 MOSPD2Q8NHP6 518 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 RHNO1Q9BSD3 238 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 ZNF442Q9H7R0 627 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 SPAG4Q9NPE6 437 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 MAN2C1Q9NTJ4 1040 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 TMEM38BQ9NVV0 291 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 RHCGQ9UBD6 479 aa17.12■□□□□ 0.33
SMC4-222ENST00000490207 IGHV4-30-2A0A087WSY4 118 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 B9A039 149 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 DHHO43323 396 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 ENTPD5O75356 428 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 QDPRP09417 244 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 OR4A8P0C604 315 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 TSPAN19P0C672 248 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 ZNF14P17017 642 aaPredicted RBP17.11■□□□□ 0.33
SMC4-222ENST00000490207 FUT4P22083 530 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 GIPRP48546 466 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 EFNA4P52798 201 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 GYS2P54840 703 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 DSCR9P59020 149 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 RUNX1T1Q06455 604 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 SNTB2Q13425 540 aaKnown RBP17.11■□□□□ 0.33
SMC4-222ENST00000490207 EFNB3Q15768 340 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 LRFN4Q6PJG9 635 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 NRMQ8IXM6 262 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 ZNF525Q8N782 197 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 BPIFA2Q96DR5 249 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 MS4A3Q96HJ5 214 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 ZNF347Q96SE7 839 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 DENND2DQ9H6A0 471 aaPredicted RBP17.11■□□□□ 0.33
SMC4-222ENST00000490207 STX18Q9P2W9 335 aaKnown RBP17.11■□□□□ 0.33
SMC4-222ENST00000490207 FBXL3Q9UKT7 428 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 HIF3AQ9Y2N7 669 aa17.11■□□□□ 0.33
SMC4-222ENST00000490207 FKBP7Q9Y680 259 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms