RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ADGRL4Q9HBW9 690 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 CHCHD3Q9NX63 227 aaKnown RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 FKBP7Q9Y680 259 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 SLC22A23A1A5C7 686 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 J3QRE1 110 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 TRMUO75648 421 aaKnown RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 MRPL3P09001 348 aaKnown RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 SBK2P0C263 348 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 TTKP33981 857 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 LINC01590Q5TEZ4 76 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 EEF1A1P5Q5VTE0 462 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 ZNF367Q7RTV3 350 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 OR6V1Q8N148 313 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 POMGNT2Q8NAT1 580 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 OR13F1Q8NGS4 319 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 KCNK17Q96T54 332 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 CNN2Q99439 309 aaKnown RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 SF3B5Q9BWJ5 86 aaKnown RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 MND1Q9BWT6 205 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 NUAK2Q9H093 628 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 TSPAN10Q9H1Z9 355 aaPredicted RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 SRA1Q9HD15 236 aaKnown RBP19.32■□□□□ 0.68
SMC4-221ENST00000489573 CLEC2DQ9UHP7 191 aa19.32■□□□□ 0.68
SMC4-221ENST00000489573 TNRC6AQ8NDV7 1962 aaKnown RBP19.31■□□□□ 0.68
SMC4-221ENST00000489573 NPIPA2E9PIF3 369 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 NPIPA3F8WFD2 350 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 K7EM74 188 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 DCTN6O00399 190 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 MYL12BO14950 172 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 AHCYL1O43865 530 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 SEC14L2O76054 403 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 IGHG3P01860 377 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 PSMB9P28065 219 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 ETV1P50549 477 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 GP2P55259 537 aaKnown RBP19.31■□□□□ 0.68
SMC4-221ENST00000489573 RPS3AP61247 264 aaKnown RBP19.31■□□□□ 0.68
SMC4-221ENST00000489573 SRYQ05066 204 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 SYT6Q5T7P8 510 aaPredicted RBP19.31■□□□□ 0.68
SMC4-221ENST00000489573 VASNQ6EMK4 673 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 ABLIM2Q6H8Q1 611 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 WDFY1Q8IWB7 410 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 RBMXL3Q8N7X1 1067 aaKnown RBP19.31■□□□□ 0.68
SMC4-221ENST00000489573 OR9K2Q8NGE7 335 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 OR6X1Q8NH79 312 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 ADAD1Q96M93 576 aaKnown RBP19.31■□□□□ 0.68
SMC4-221ENST00000489573 EMC6Q9BV81 110 aa19.31■□□□□ 0.68
SMC4-221ENST00000489573 URB1O60287 2271 aaKnown RBP19.3■□□□□ 0.68
SMC4-221ENST00000489573 CHD8Q9HCK8 2581 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 ACACAQ13085 2346 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 FAM171A2A8MVW0 826 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 SLC17A1Q14916 467 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 ZBTB46Q86UZ6 589 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 ACBD7Q8N6N7 88 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 NANOGP1Q8N7R0 232 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 EXTL1Q92935 676 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 ZNF845Q96IR2 970 aaPredicted RBP19.3■□□□□ 0.68
SMC4-221ENST00000489573 PAQR5Q9NXK6 330 aaPredicted RBP19.3■□□□□ 0.68
SMC4-221ENST00000489573 SPRR3Q9UBC9 169 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 B9D1Q9UPM9 204 aa19.3■□□□□ 0.68
SMC4-221ENST00000489573 A0A087WV48 116 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 TMEM129A0AVI4 362 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 SLC35F4A4IF30 521 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 C12orf71A8MTZ7 269 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 C1QTNF9BB2RNN3 333 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 SLC16A7O60669 478 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 IGHG1P01857 330 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 C1QTNF9P0C862 333 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 CRABP1P29762 137 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 ACTC1P68032 377 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 ACTA1P68133 377 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 FOXB2Q5VYV0 432 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 DNM1P34Q6PK57 102 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 CREB3L2Q70SY1 520 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 SYT14Q8NB59 555 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 NOXO1Q8NFA2 376 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 OR10H4Q8NGA5 316 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 SNRNP27Q8WVK2 155 aaKnown RBP19.29■□□□□ 0.68
SMC4-221ENST00000489573 ROBO4Q8WZ75 1007 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 ABHD17AQ96GS6 310 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 SLC25A44Q96H78 314 aaPredicted RBP19.29■□□□□ 0.68
SMC4-221ENST00000489573 RACGAP1Q9H0H5 632 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 RERGLQ9H628 205 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 INPP5EQ9NRR6 644 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 LSM2Q9Y333 95 aaKnown RBP19.29■□□□□ 0.68
SMC4-221ENST00000489573 CELSR3Q9NYQ7 3312 aa19.29■□□□□ 0.68
SMC4-221ENST00000489573 ZNF726A6NNF4 738 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 LIMS3P0CW19 117 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 LIMS4P0CW20 117 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 CTLA4P16410 223 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 NAA10P41227 235 aaPredicted RBP19.28■□□□□ 0.68
SMC4-221ENST00000489573 CLDN17P56750 224 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 CXADRP78310 365 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 MED22Q15528 200 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 FCRLAQ7L513 359 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 OR5M11Q96RB7 305 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 MRPL13Q9BYD1 178 aaKnown RBP19.28■□□□□ 0.68
SMC4-221ENST00000489573 RBM38Q9H0Z9 239 aaKnown RBP19.28■□□□□ 0.68
SMC4-221ENST00000489573 ERVK13-1Q9NX77 482 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 B3GNT3Q9Y2A9 372 aa19.28■□□□□ 0.68
SMC4-221ENST00000489573 ACACBO00763 2458 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms