RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CCDC134Q9H6E4 229 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 MRPL39Q9NYK5 338 aaKnown RBP10.1□□□□□ -0.79
ACTN4-206ENST00000489451 RPS6KB2Q9UBS0 482 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 FZR1Q9UM11 496 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 USP22Q9UPT9 525 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF281Q9Y2X9 895 aa10.1□□□□□ -0.79
ACTN4-206ENST00000489451 TENM1Q9UKZ4 2725 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 FAM157AC9JC47 383 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 M0R3H8 397 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 MFN2O95140 757 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 NPPAP01160 153 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 PATE4P0C8F1 98 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CD79AP11912 226 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 ITGA2P17301 1181 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 TCN1P20061 433 aaPredicted RBP10.09□□□□□ -0.79
ACTN4-206ENST00000489451 COL8A2P25067 703 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 MDH1P40925 334 aaKnown RBP10.09□□□□□ -0.79
ACTN4-206ENST00000489451 ALDH3B1P43353 468 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CAPZA2P47755 286 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 PCBP3P57721 371 aaKnown RBP10.09□□□□□ -0.79
ACTN4-206ENST00000489451 NCALDP61601 193 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 IL1RL1Q01638 556 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 PUDPQ08623 228 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 RBBP4Q09028 425 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CAMK2DQ13557 499 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 SELPLGQ14242 412 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 GSG1Q2KHT4 349 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 ZNF813Q6ZN06 617 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 ARMC8Q8IUR7 673 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CCDC36Q8IYA8 594 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 LINC01356Q8N9X3 169 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 IL17RDQ8NFM7 739 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CLDND2Q8NHS1 167 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 SLC47A1Q96FL8 570 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 ARHGDIGQ99819 225 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 FOXB1Q99853 325 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 SYT3Q9BQG1 590 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 EVA1AQ9H8M9 152 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 DYNLRB1Q9NP97 96 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 SELENONQ9NZV5 590 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 TMEFF2Q9UIK5 374 aaPredicted RBP10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CMAHPQ9Y471 501 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 CORINQ9Y5Q5 1042 aa10.09□□□□□ -0.79
ACTN4-206ENST00000489451 DYSFO75923 2080 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 BBIP1A8MTZ0 92 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 SYNGR3O43761 229 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 AKAP8O43823 692 aaKnown RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 RP2O75695 350 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 OPN1SWP03999 348 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 IFNGR1P15260 489 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 NQO1P15559 274 aaKnown RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 HNF1AP20823 631 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 GLRXP35754 106 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 GIPRP48546 466 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 PTDSS1P48651 473 aaKnown RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 EVX1P49640 407 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 DVL1P1P54792 670 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 RGS8P57771 180 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 PMS2P3Q13401 168 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 RAB39AQ14964 217 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 DUSP7Q16829 419 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 COQ5Q5HYK3 327 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 INTS11Q5TA45 600 aaKnown RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 PXKQ7Z7A4 578 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 RBM45Q8IUH3 476 aaKnown RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 SKA3Q8IX90 412 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 PAQR4Q8N4S7 273 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 SMYD1Q8NB12 490 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 PCYOX1LQ8NBM8 494 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 TMEM54Q969K7 222 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 TMEM43Q9BTV4 400 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 ULBP2Q9BZM5 246 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 TAS2R5Q9NYW4 299 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 REV1Q9UBZ9 1251 aa10.08□□□□□ -0.8
ACTN4-206ENST00000489451 FBXO9Q9UK97 447 aaPredicted RBP10.08□□□□□ -0.8
ACTN4-206ENST00000489451 C11orf98E9PRG8 122 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 M0R233 179 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 SLC22A2O15244 555 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 SERPINI2O75830 405 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 CRYBA2P53672 197 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 BIDP55957 195 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 MTPNP58546 118 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 RAB1AP62820 205 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 SF3A3Q12874 501 aaKnown RBP eCLIP10.07□□□□□ -0.87e-14■□□□□ 10.8
ACTN4-206ENST00000489451 KLF10Q13118 480 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 ZNF74Q16587 644 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 TRMT5Q32P41 509 aaKnown RBP10.07□□□□□ -0.8
ACTN4-206ENST00000489451 TMEM255AQ5JRV8 349 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 LRFN4Q6PJG9 635 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 RINLQ6ZS11 566 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 C1orf229Q6ZS94 237 aaPredicted RBP10.07□□□□□ -0.8
ACTN4-206ENST00000489451 PATL1Q86TB9 770 aaKnown RBP10.07□□□□□ -0.8
ACTN4-206ENST00000489451 RETREG3Q86VR2 466 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 RANBP3LQ86VV4 465 aaPredicted RBP10.07□□□□□ -0.8
ACTN4-206ENST00000489451 MEX3DQ86XN8 651 aaKnown RBP10.07□□□□□ -0.8
ACTN4-206ENST00000489451 RFLNBQ8N5W9 214 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 LRRC17Q8N6Y2 441 aa10.07□□□□□ -0.8
ACTN4-206ENST00000489451 SEMA6DQ8NFY4 1073 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms