RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 LRRC75A-AS1Q8N1F1 130 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 FAM86B1Q8N7N1 296 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 OR51A7Q8NH64 312 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 MOSPD2Q8NHP6 518 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 FOXB1Q99853 325 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 ANKRD19PQ9H560 264 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 NDUFAF4Q9P032 175 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 STX18Q9P2W9 335 aaKnown RBP11.68□□□□□ -0.54
CCL28-202ENST00000489442 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
CCL28-202ENST00000489442 A0A087WUU8 490 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 ENTPD5O75356 428 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 DIRAS1O95057 198 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 PRSS23O95084 383 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 SOD3P08294 240 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 QDPRP09417 244 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 DANCRP0C864 163 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 CD79AP11912 226 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 CD99P14209 185 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 B4GALT1P15291 398 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 MAKP20794 623 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 FUT4P22083 530 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 PTH2RP49190 550 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 FABP6P51161 128 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 SMIM11AP58511 58 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCL28-202ENST00000489442 VLDLRP98155 873 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 NPRL3Q12980 569 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 TOP3AQ13472 1001 aaPredicted RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 Q5PR19 223 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 AGAP6Q5VW22 663 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 PODNL1Q6PEZ8 512 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 PIWIL3Q7Z3Z3 882 aaKnown RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 MEX3DQ86XN8 651 aaKnown RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 WDFY1Q8IWB7 410 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 FBXL14Q8N1E6 418 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 ARHGAP24Q8N264 748 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 SYT14Q8NB59 555 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 OR52J3Q8NH60 311 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 NANOS1Q8WY41 292 aaKnown RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 TMEM54Q969K7 222 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 TRMT61AQ96FX7 289 aaKnown RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 C7orf34Q96L11 122 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 NDEL1Q9GZM8 345 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 NELFAQ9H3P2 528 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 KRCC1Q9NPI7 259 aaPredicted RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 TMEM5Q9Y2B1 443 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 HIF3AQ9Y2N7 669 aa11.67□□□□□ -0.54
CCL28-202ENST00000489442 SETD2Q9BYW2 2564 aaPredicted RBP11.67□□□□□ -0.54
CCL28-202ENST00000489442 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 IGHV1-18A0A0C4DH31 117 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 A0A1W2PRQ8 180 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 E7EQL1 145 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 ATP6V1G2-DDX39BF2Z307 99 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 DHHO43323 396 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 PGA4P0DJD7 388 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 PGA3P0DJD8 388 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 CBR1P16152 277 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 ACADSP16219 412 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 ARR3P36575 388 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 RPL4P36578 427 aaKnown RBP11.66□□□□□ -0.54
CCL28-202ENST00000489442 GPR4P46093 362 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 SLC9A3P48764 834 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 ZNF84P51523 738 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 IDH3GP51553 393 aaPredicted RBP11.66□□□□□ -0.54
CCL28-202ENST00000489442 ATP5J2P56134 94 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 CTXN1P60606 82 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 MYBPC1Q00872 1141 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 PIGFQ07326 219 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 DGCR6Q14129 220 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 TAF11Q15544 211 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 FXNQ16595 210 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 PGGHGQ32M88 737 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 ANKDD1AQ495B1 522 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 RINLQ6ZS11 566 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 TSEN54Q7Z6J9 526 aaKnown RBP11.66□□□□□ -0.54
CCL28-202ENST00000489442 MDP1Q86V88 176 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 WFDC11Q8NEX6 87 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 SLC7A13Q8TCU3 470 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 ASB10Q8WXI3 467 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 TNFRSF13CQ96RJ3 184 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 DHRS9Q9BPW9 319 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 GSX2Q9BZM3 304 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 TXNIPQ9H3M7 391 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 AURKCQ9UQB9 309 aa11.66□□□□□ -0.54
CCL28-202ENST00000489442 CENPBD1B2RD01 187 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 TRMUO75648 421 aaKnown RBP11.65□□□□□ -0.54
CCL28-202ENST00000489442 GADD45GO95257 159 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 FARS2O95363 451 aaKnown RBP11.65□□□□□ -0.54
CCL28-202ENST00000489442 STAMBPO95630 424 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 HLA-HP01893 362 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 FABP3P05413 133 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 TSPAN19P0C672 248 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 CECR9P0C854 216 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 OR8G3PP0DMU2 310 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 NR2C1P13056 603 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 TTKP33981 857 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 ACVR1BP36896 505 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 CDKN1AP38936 164 aa11.65□□□□□ -0.54
CCL28-202ENST00000489442 SPIBQ01892 262 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms