RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 OR52B2Q96RD2 323 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 PARD6BQ9BYG5 372 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 EVA1AQ9H8M9 152 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 ZNF275Q9NSD4 429 aaPredicted RBP8.04□□□□□ -1.12
SNX17-207ENST00000489402 NKIRAS1Q9NYS0 192 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 TREM2Q9NZC2 230 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 GPR160Q9UJ42 338 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 FZR1Q9UM11 496 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 CORO2BQ9UQ03 480 aa8.04□□□□□ -1.12
SNX17-207ENST00000489402 CMYA5Q8N3K9 4069 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 TRAV20A0A0B4J274 112 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 SLC22A23A1A5C7 686 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 FAM157AC9JC47 383 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 C11orf98E9PRG8 122 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 PLPP3O14495 311 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 TPST1O60507 370 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 OR6A2O95222 327 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 FARS2O95363 451 aaKnown RBP8.03□□□□□ -1.12
SNX17-207ENST00000489402 PNPP00491 289 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 ADORA3P0DMS8 318 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 OR8G3PP0DMU2 310 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 NAT2P11245 290 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 HOXB9P17482 250 aaPredicted RBP8.03□□□□□ -1.12
SNX17-207ENST00000489402 SLC6A2P23975 617 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 BIDP55957 195 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 MYBPC1Q00872 1141 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 SCARB2Q14108 478 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 RAB39AQ14964 217 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 LRIF1Q5T3J3 769 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
SNX17-207ENST00000489402 FAHD2BQ6P2I3 314 aaPredicted RBP8.03□□□□□ -1.12
SNX17-207ENST00000489402 TMEM154Q6P9G4 183 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 THSD4Q6ZMP0 1018 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 ARMC8Q8IUR7 673 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 SEMA6DQ8NFY4 1073 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 OR5J2Q8NH18 312 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 YIPF5Q969M3 257 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 ZMYND19Q96E35 227 aaPredicted RBP8.03□□□□□ -1.12
SNX17-207ENST00000489402 FAHD2AQ96GK7 314 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 JMJD8Q96S16 334 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 TMEM43Q9BTV4 400 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 PLA2G12AQ9BZM1 189 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 RACGAP1Q9H0H5 632 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 CDH20Q9HBT6 801 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 SLC25A37Q9NYZ2 338 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 ZNF224Q9NZL3 707 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 MYEF2Q9P2K5 600 aaKnown RBP8.03□□□□□ -1.12
SNX17-207ENST00000489402 ANGPT4Q9Y264 503 aa8.03□□□□□ -1.12
SNX17-207ENST00000489402 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.12
SNX17-207ENST00000489402 EVPLLA8MZ36 301 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 TRIM77I1YAP6 450 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 WNT9BO14905 357 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 POLR3GO15318 223 aaPredicted RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 SPRY1O43609 319 aaPredicted RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 RGS9O75916 674 aaPredicted RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 NCR1O76036 304 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 MT-ND5P03915 603 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SERPINA5P05154 406 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 VIMP08670 466 aaKnown RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 FAM157BP0CG42 384 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 EPHA1P21709 976 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 AQP1P29972 269 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SLC18A1P54219 525 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 CDH12P55289 794 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 KLF3P57682 345 aaPredicted RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 TEKQ02763 1124 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 RBBP4Q09028 425 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 HNRNPA0Q13151 305 aaKnown RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 PCGF3Q3KNV8 242 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 ALKBH6Q3KRA9 238 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 MMEL1Q495T6 779 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 TMEM53Q6P2H8 277 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 NHLRC1Q6VVB1 395 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SLC35D2Q76EJ3 337 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 DPPA2Q7Z7J5 298 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SKA3Q8IX90 412 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SLC22A24Q8N4F4 322 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 C3orf56Q8N813 242 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 HIPK4Q8NE63 616 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SLC30A7Q8NEW0 376 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 OR6X1Q8NH79 312 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 GCDHQ92947 438 aaPredicted RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 ZNF566Q969W8 418 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 RAB39BQ96DA2 213 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SPDL1Q96EA4 605 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 LRMDAQ9H2I8 198 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 C1orf198Q9H425 327 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 TMEM38AQ9H6F2 299 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 RNF121Q9H920 327 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 TCF7L2Q9NQB0 619 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SLCO1C1Q9NYB5 712 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 GLTPQ9NZD2 209 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 SLAMF8Q9P0V8 285 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 TAAR3PQ9P1P4 343 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.02□□□□□ -1.13
SNX17-207ENST00000489402 PCDHB10Q9UN67 800 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 USH1CQ9Y6N9 552 aa8.02□□□□□ -1.13
SNX17-207ENST00000489402 DYSFO75923 2080 aa8.01□□□□□ -1.13
SNX17-207ENST00000489402 PKD1L1Q8TDX9 2849 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms