RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 CD79AP11912 226 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 NPR2P20594 1047 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 THBS4P35443 961 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 C6orf52Q5T4I8 152 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 DEF8Q6ZN54 512 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 HIST3H2AQ7L7L0 130 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 PIWIL3Q7Z3Z3 882 aaKnown RBP10.86□□□□□ -0.67
SRRM1-216ENST00000489130 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 NKAIN4Q8IVV8 208 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 OR2T12Q8NG77 320 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 PFN4Q8NHR9 129 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 HIST1H2ACQ93077 130 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 ZNF566Q969W8 418 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 SLC25A44Q96H78 314 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-216ENST00000489130 DOK1Q99704 481 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 MYOZ1Q9NP98 299 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-216ENST00000489130 ARMCX1Q9P291 453 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 RIMS3Q9UJD0 308 aa10.86□□□□□ -0.67
SRRM1-216ENST00000489130 CUBNO60494 3623 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 ARFGEF3Q5TH69 2177 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 VSTM5A8MXK1 200 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 hCG_2039718K7EN88 272 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 SHOX2O60902 331 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 OR7A10O76100 309 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 UBL3O95164 117 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 TSPAN19P0C672 248 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 UMPSP11172 480 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 ZNF35P13682 527 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 NR4A1P22736 598 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 KDELR2P33947 212 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 OR1E2P47887 323 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 GIPRP48546 466 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 PTDSS1P48651 473 aaKnown RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 PDLIM4P50479 330 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 UGT2B15P54855 530 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 RPL18Q07020 188 aaKnown RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 PIGFQ07326 219 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 SNTB2Q13425 540 aaKnown RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 PIN1Q13526 163 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 DAG1Q14118 895 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 MELKQ14680 651 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 HIST3H3Q16695 136 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 CYBRD1Q53TN4 286 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 HSP90B2PQ58FF3 399 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 KRT80Q6KB66 452 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 LRFN4Q6PJG9 635 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 ARPINQ7Z6K5 226 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 SLC22A24Q8N4F4 322 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 RP9Q8TA86 221 aaKnown RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 TMEM255BQ8WV15 326 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 TMEM239Q8WW34 195 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 LIPHQ8WWY8 451 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 RCN3Q96D15 328 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 SEPHS2Q99611 448 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 VRK1Q99986 396 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-216ENST00000489130 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 MED4Q9NPJ6 270 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 YAE1D1Q9NRH1 226 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 FBXL3Q9UKT7 428 aa10.85□□□□□ -0.67
SRRM1-216ENST00000489130 LOC390937A0A1W2PQ73 354 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 TMEM129A0AVI4 362 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 ELOVL7A1L3X0 281 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 A8MV72 311 aaPredicted RBP10.84□□□□□ -0.67
SRRM1-216ENST00000489130 CENPBD1B2RD01 187 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 BLOC1S5-TXNDC5H3BN57 136 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 ENTPD5O75356 428 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 RAB36O95755 333 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 BCL10O95999 233 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 IGHG1P01857 330 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 FUT1P19526 365 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 USF1P22415 310 aaPredicted RBP10.84□□□□□ -0.67
SRRM1-216ENST00000489130 NR4A2P43354 598 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 RAB1AP62820 205 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 SELENOWP63302 87 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 LRRC23Q53EV4 343 aaPredicted RBP10.84□□□□□ -0.67
SRRM1-216ENST00000489130 SPATA21Q7Z572 469 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 HIPK1Q86Z02 1210 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 ZNF584Q8IVC4 421 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 MICU2Q8IYU8 434 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 SVOPLQ8N434 492 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 SGTBQ96EQ0 304 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 MRPL13Q9BYD1 178 aaKnown RBP10.84□□□□□ -0.67
SRRM1-216ENST00000489130 RAB1BQ9H0U4 201 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 C20orf141Q9NUB4 165 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 TMEM38BQ9NVV0 291 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 CMTM6Q9NX76 183 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 CMAHPQ9Y471 501 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 ALPK2Q86TB3 2170 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
SRRM1-216ENST00000489130 ABCA1O95477 2261 aa10.83□□□□□ -0.68
SRRM1-216ENST00000489130 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
SRRM1-216ENST00000489130 A0A1W2PRG6 482 aa10.83□□□□□ -0.68
SRRM1-216ENST00000489130 NPIPB13A6NJU9 1138 aa10.83□□□□□ -0.68
SRRM1-216ENST00000489130 NPIPB4C9JG80 1138 aa10.83□□□□□ -0.68
SRRM1-216ENST00000489130 DHHO43323 396 aa10.83□□□□□ -0.68
SRRM1-216ENST00000489130 SERPINA5P05154 406 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms