RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 WACQ9BTA9 647 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 NANSQ9NR45 359 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 NPAP1Q9NZP6 1156 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 KLHL21Q9UJP4 597 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 CLEC4AQ9UMR7 237 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 DOCK10Q96BY6 2186 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 TRAV36DV7A0A075B6V5 113 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 IGLV3-32A0A0A0MS00 114 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 IMPA2O14732 288 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 LANCL1O43813 399 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 SUSD5O60279 629 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 LIFP15018 202 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 PRKCAP17252 672 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 RPL4P36578 427 aaKnown RBP10.97□□□□□ -0.65
HDAC6-230ENST00000488543 RPS5P46782 204 aaKnown RBP10.97□□□□□ -0.65
HDAC6-230ENST00000488543 PRPS1P60891 318 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 INPP5JQ15735 1006 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-230ENST00000488543 KLHL12Q53G59 568 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 ZNF468Q5VIY5 522 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-230ENST00000488543 FAM122BQ7Z309 247 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 NANOGNBQ7Z5D8 188 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 NPEPL1Q8NDH3 523 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 RASD2Q96D21 266 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 OR51V1Q9H2C8 321 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 FKRPQ9H9S5 495 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 MED11Q9P086 117 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 TNFRSF10DQ9UBN6 386 aa10.97□□□□□ -0.65
HDAC6-230ENST00000488543 A0A0G2JMP0 313 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 A0A0X1KG70 313 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 SLC22A31A6NKX4 558 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 AKR7A2O43488 359 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 RPL18Q07020 188 aaKnown RBP10.96□□□□□ -0.65
HDAC6-230ENST00000488543 IDNKQ5T6J7 187 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 LCN1P1Q5VSP4 162 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 TRIQKQ629K1 86 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 TMEM91Q6ZNR0 172 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 ASB18Q6ZVZ8 466 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 NOXA1Q86UR1 476 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 RPS19BP1Q86WX3 136 aaKnown RBP10.96□□□□□ -0.65
HDAC6-230ENST00000488543 ARIH2OSQ8N7S6 290 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 YIPF7Q8N8F6 280 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 OR4M2Q8NGB6 313 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 ZPLD1Q8TCW7 415 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 ADAMTS17Q8TE56 1095 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 TIMP4Q99727 224 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 KLHL1Q9NR64 748 aa10.96□□□□□ -0.65
HDAC6-230ENST00000488543 BOD1L1Q8NFC6 3051 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 FAM172BPA6NC97 362 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 FAM25AB3EWG3 89 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 FAM25CB3EWG5 89 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 FAM25GB3EWG6 89 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 E9PI62 339 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 BLOC1S5-TXNDC5H3BN57 136 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 MAGEB4O15481 346 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-230ENST00000488543 F10P00742 488 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 GYPBP06028 91 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 CD14P08571 375 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 WT1P19544 449 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-230ENST00000488543 MAP2K3P46734 347 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 AGFG1P52594 562 aaKnown RBP10.96□□□□□ -0.66
HDAC6-230ENST00000488543 SLC16A1P53985 500 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 OR10A3P58181 314 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 ARSKQ6UWY0 536 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 RPTNQ6XPR3 784 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 GDPD1Q8N9F7 314 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 FAM98AQ8NCA5 519 aaKnown RBP10.96□□□□□ -0.66
HDAC6-230ENST00000488543 ST8SIA1Q92185 356 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 RELTQ969Z4 430 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 DNAJA3Q96EY1 480 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 Q96M85 177 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 NMNAT2Q9BZQ4 307 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 B3GNT4Q9C0J1 378 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 PPP1R3EQ9H7J1 279 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 ADGRL4Q9HBW9 690 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 KLRF1Q9NZS2 232 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 KLK13Q9UKR3 277 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 GSTK1Q9Y2Q3 226 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 SLC6A5Q9Y345 797 aa10.96□□□□□ -0.66
HDAC6-230ENST00000488543 ETV2O00321 342 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 SLC34A2O95436 690 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 TXNDC12O95881 172 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 HPP00738 406 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 ELK1P19419 428 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 ALG10Q5BKT4 473 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 ZNF57Q68EA5 555 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 C19orf18Q8NEA5 215 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 STK35Q8TDR2 534 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 ZNRF4Q8WWF5 429 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 PSMF1Q92530 271 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 SNX18Q96RF0 628 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 OR11A1Q9GZK7 315 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 CCDC86Q9H6F5 360 aaKnown RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 HAO2Q9NYQ3 351 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 WIF1Q9Y5W5 379 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 CHCHD2Q9Y6H1 151 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-230ENST00000488543 TEX13CA0A0J9YWL9 993 aa10.95□□□□□ -0.66
HDAC6-230ENST00000488543 A0A1W2PPK0 400 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms