RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 MRPS24Q96EL2 167 aaKnown RBP12.46□□□□□ -0.41
COPS7B-221ENST00000488111 PRRC1Q96M27 445 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 ZPBPQ9BS86 351 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 SLC26A1Q9H2B4 701 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 ISG20L2Q9H9L3 353 aaKnown RBP12.46□□□□□ -0.41
COPS7B-221ENST00000488111 MGAT4CQ9UBM8 478 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 GPR160Q9UJ42 338 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 PADI1Q9ULC6 663 aa12.46□□□□□ -0.41
COPS7B-221ENST00000488111 PTRH2Q9Y3E5 179 aaKnown RBP12.46□□□□□ -0.41
COPS7B-221ENST00000488111 CCDC88CQ9P219 2028 aa12.46□□□□□ -0.42
COPS7B-221ENST00000488111 ANXA2P2A6NMY6 339 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 POM121CA8CG34 1229 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 C9J4A7 227 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 CTDSPLO15194 276 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 SURF4O15260 269 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 HMGN1P05114 100 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 CD53P19397 219 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 ANXA11P50995 505 aaKnown RBP12.45□□□□□ -0.42
COPS7B-221ENST00000488111 RAP2BP61225 183 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 TSPAN31Q12999 210 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 GNA13Q14344 377 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 ALKAL2Q6UX46 152 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 MEX3DQ86XN8 651 aaKnown RBP12.45□□□□□ -0.42
COPS7B-221ENST00000488111 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 CDRT4Q8N9R6 151 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 OR4N2Q8NGD1 307 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 THAP4Q8WY91 577 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 DMRTA2Q96SC8 542 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 TREX2Q9BQ50 279 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-221ENST00000488111 QRSL1Q9H0R6 528 aaKnown RBP12.45□□□□□ -0.42
COPS7B-221ENST00000488111 BABAM2Q9NXR7 383 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 GXYLT2A0PJZ3 443 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 SUSD5O60279 629 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 FCMRO60667 390 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 ITGA10O75578 1167 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 RP2O75695 350 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 DDAH2O95865 285 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 ADRB1P08588 477 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 CPN1P15169 458 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 GALNSP34059 522 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 PSG6Q00889 435 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 SLC25A35Q3KQZ1 300 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 FAM69AQ5T7M9 428 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 BAIAP2L2Q6UXY1 529 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 OR4Q3Q8NH05 313 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 ZNF721Q8TF20 911 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 NUDT9Q9BW91 350 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 MED17Q9NVC6 651 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 FBXO34Q9NWN3 711 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 FLVCR2Q9UPI3 526 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 CAMK2AQ9UQM7 478 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 KCNK7Q9Y2U2 307 aa12.45□□□□□ -0.42
COPS7B-221ENST00000488111 CNOT1A5YKK6 2376 aaKnown RBP12.45□□□□□ -0.42
COPS7B-221ENST00000488111 A0A087WUU8 490 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 DUXAA6NLW8 204 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 PRAMEF2O60811 474 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 KLF7O75840 302 aaPredicted RBP12.44□□□□□ -0.42
COPS7B-221ENST00000488111 OR2A4O95047 310 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 EPPINO95925 133 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 PLATP00750 562 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 GABRA1P14867 456 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 TCN2P20062 427 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 S100A11P31949 105 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 RPS18P62269 152 aaKnown RBP12.44□□□□□ -0.42
COPS7B-221ENST00000488111 FAM27D1Q5T7N8 215 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 SIRT6Q8N6T7 355 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 COX18Q8N8Q8 333 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 ZNF454Q8N9F8 522 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 BBS1Q8NFJ9 593 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 SMIM4Q8WVI0 70 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 DAZLQ92904 295 aaKnown RBP12.44□□□□□ -0.42
COPS7B-221ENST00000488111 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 ZFP3Q96NJ6 502 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 OR2A7Q96R45 310 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 TIMP4Q99727 224 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 SPRY4Q9C004 299 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 CA10Q9NS85 328 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 NKIRAS2Q9NYR9 191 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 FAM74A7A6NL05 159 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 HNRNPCL2B2RXH8 293 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 ZIC2O95409 532 aaPredicted RBP12.44□□□□□ -0.42
COPS7B-221ENST00000488111 UMODP07911 640 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 PPP3CBP16298 524 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 VEGFCP49767 419 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 SLC37A1P57057 533 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 SCRN3Q0VDG4 424 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 CLEC12AQ5QGZ9 265 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 TMPRSS12Q86WS5 348 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 PDZD9Q8IXQ8 264 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 OR6T1Q8NGN1 323 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 VSTM2LQ96N03 204 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 IFT27Q9BW83 186 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 EVA1AQ9H8M9 152 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 WDR54Q9H977 334 aa12.44□□□□□ -0.42
COPS7B-221ENST00000488111 PURGQ9UJV8 347 aaKnown RBP12.44□□□□□ -0.42
COPS7B-221ENST00000488111 MRPS7Q9Y2R9 242 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms