RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZNF736B4DX44 427 aaPredicted RBP10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SIGLEC6O43699 453 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SYNGR4O95473 234 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 BIDP55957 195 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 CSNK2A1P68400 391 aaPredicted RBP10.78□□□□□ -0.68
TRA2B-214ENST00000487615 PSG6Q00889 435 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 LRRC37A5PQ49AS3 106 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 TCEAL6Q6IPX3 200 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 H1FNTQ75WM6 255 aaPredicted RBP10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SYT9Q86SS6 491 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 GIMAP1Q8WWP7 306 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SLC35B4Q969S0 331 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SFXN2Q96NB2 322 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 ATF6BQ99941 703 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF160Q9HCG1 818 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 MYLKQ15746 1914 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 B4DXG7 233 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 F5H5K5 113 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 YKT6O15498 198 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 NTN1O95631 604 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 MPIG6BO95866 241 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 IFNA21P01568 189 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 GALP22466 123 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 MSX1P28360 303 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 HOXC12P31275 282 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 GPR3P46089 330 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 RIPPLY1Q0D2K3 151 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 IL10RAQ13651 578 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 GPR176Q14439 515 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SWI5Q1ZZU3 235 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 SUN5Q8TC36 379 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 ULBP3Q9BZM4 244 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 GALNT9Q9HCQ5 603 aa10.78□□□□□ -0.68
TRA2B-214ENST00000487615 TEX13DA0A0J9YY54 714 aaPredicted RBP10.77□□□□□ -0.68
TRA2B-214ENST00000487615 ARPC3O15145 178 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 NUDT21O43809 227 aaKnown RBP10.77□□□□□ -0.68
TRA2B-214ENST00000487615 TP53P04637 393 aaPredicted RBP10.77□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF28P17035 718 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 EVI2BP34910 448 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF141Q15928 474 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 GLYR1Q49A26 553 aaPredicted RBP10.77□□□□□ -0.68
TRA2B-214ENST00000487615 NKAPLQ5M9Q1 402 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 RAB12Q6IQ22 244 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 BEST3Q8N1M1 668 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 C10orf90Q96M02 699 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF701Q9NV72 531 aaPredicted RBP10.77□□□□□ -0.68
TRA2B-214ENST00000487615 SLC39A1Q9NY26 324 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 CLEC1BQ9P126 229 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 EMC9Q9Y3B6 208 aa10.77□□□□□ -0.68
TRA2B-214ENST00000487615 HRO43593 1189 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 AMY2BP19961 511 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 CRYBA2P53672 197 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 TFF2Q03403 129 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 NKPD1Q17RQ9 610 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 LINC00346Q8IVM7 164 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 IL22RA1Q8N6P7 574 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 CTRCQ99895 268 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 ERVMER34-1Q9H9K5 563 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 FBXL3Q9UKT7 428 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 MBTPS2O43462 519 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 SC5DO75845 299 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 RAF1P04049 648 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 CD63P08962 238 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 APOBEC1P41238 236 aaKnown RBP10.77□□□□□ -0.69
TRA2B-214ENST00000487615 CAMK2DQ13557 499 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 ZNF74Q16587 644 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 GPR155Q7Z3F1 870 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 OR51D1Q8NGF3 324 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.77□□□□□ -0.69
TRA2B-214ENST00000487615 NUDT9Q9BW91 350 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 OR11A1Q9GZK7 315 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 PLEK2Q9NYT0 353 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 KLF15Q9UIH9 416 aa10.77□□□□□ -0.69
TRA2B-214ENST00000487615 WRBO00258 174 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 SULT1B1O43704 296 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 HTR2CP28335 458 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 CHRFAM7AQ494W8 412 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 SPTSSAQ969W0 71 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 TM4SF19Q96DZ7 209 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 WWTR1Q9GZV5 400 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 LDAHQ9H6V9 325 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 SLC7A11Q9UPY5 501 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 COA3Q9Y2R0 106 aaPredicted RBP10.76□□□□□ -0.69
TRA2B-214ENST00000487615 PRICKLE3O43900 615 aaPredicted RBP10.76□□□□□ -0.69
TRA2B-214ENST00000487615 SLC22A5O76082 557 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 SPNP16150 400 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 RPS27P42677 84 aaKnown RBP10.76□□□□□ -0.69
TRA2B-214ENST00000487615 TAS2R19P59542 299 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 BTG1P62324 171 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 PLP2Q04941 152 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 FUT5Q11128 374 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 OR6V1Q8N148 313 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 VSTM2LQ96N03 204 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 SORCS2Q96PQ0 1159 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 PTTG3PQ9NZH4 202 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
TRA2B-214ENST00000487615 STEAP1Q9UHE8 339 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms