RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SLC6A7Q99884 636 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 SUCNR1Q9BXA5 334 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 ESM1Q9NQ30 184 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 TAAR3PQ9P1P4 343 aa16.61■□□□□ 0.25
SMPDL3A-202ENST00000487215 A0A0G2JMP0 313 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 A0A0X1KG70 313 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 ZNF726A6NNF4 738 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 C17orf100A8MU93 164 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 LRRN3E7EW58 273 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 DEAF1O75398 565 aaPredicted RBP16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 SERPINI2O75830 405 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 CLPTM1O96005 669 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 SERPINA5P05154 406 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 ADRA2CP18825 462 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 CSNK1A1P48729 337 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 CCL8P80075 99 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 PMS2P3Q13401 168 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 FAM91A1Q658Y4 838 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 NXNQ6DKJ4 435 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 MIER2Q8N344 545 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 OR4M2Q8NGB6 313 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 OR9I1Q8NGQ6 314 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 RNF217Q8TC41 542 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 SLC47A1Q96FL8 570 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 TSPAN32Q96QS1 320 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 EPYCQ99645 322 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 HINT3Q9NQE9 182 aaKnown RBP16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 MRPL39Q9NYK5 338 aaKnown RBP16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 ZIM2Q9NZV7 527 aa16.6■□□□□ 0.25
SMPDL3A-202ENST00000487215 C5orf58C9J3I9 102 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 TPST1O60507 370 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 FAM157BP0CG42 384 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 ETS2P15036 469 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 SLC18A1P54219 525 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 FADDQ13158 208 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 PRR31Q5SQ13 230 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 DHRS4L2Q6PKH6 230 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 PIWIL3Q7Z3Z3 882 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 PXKQ7Z7A4 578 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 PAQR4Q8N4S7 273 aaPredicted RBP16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 ZDHHC22Q8N966 263 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 RAB39BQ96DA2 213 aa16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 PAIP1Q9H074 479 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 SDR39U1Q9NRG7 319 aaPredicted RBP16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 TESQ9UGI8 421 aaKnown RBP16.59■□□□□ 0.25
SMPDL3A-202ENST00000487215 IGLV3-9A0A075B6K5 115 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 A0A0B4J2E0 115 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 A0A1B0GX12 115 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 TMEM120BA0PK00 339 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 J3QLI3 93 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 CLIC1O00299 241 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 PLPP3O14495 311 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 SNNO75324 88 aaPredicted RBP16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 BCL10O95999 233 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 KITP10721 976 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 AHCYP23526 432 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 POLR2JP52435 117 aaKnown RBP16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 KLF3P57682 345 aaPredicted RBP16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 ERVS71-1P61550 626 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 NCALDP61601 193 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 PCGF3Q3KNV8 242 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 MMEL1Q495T6 779 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 TMEM154Q6P9G4 183 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 WDR88Q6ZMY6 472 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 SLC22A24Q8N4F4 322 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 SLC30A7Q8NEW0 376 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 NFKBIDQ8NI38 313 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 MAELQ96JY0 434 aaKnown RBP16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 RAD21L1Q9H4I0 556 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 NKIRAS1Q9NYS0 192 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 SELENONQ9NZV5 590 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 GPR160Q9UJ42 338 aa16.58■□□□□ 0.24
SMPDL3A-202ENST00000487215 SLC22A23A1A5C7 686 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 ZNF500O60304 480 aaPredicted RBP16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 IGHV2-5P01817 119 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 CCL2P13500 99 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 ZNF250P15622 560 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 HOXB9P17482 250 aaPredicted RBP16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 CRYBB2P43320 205 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 BIDP55957 195 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 SELENOVP59797 346 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 RBBP4Q09028 425 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 OR1Q1Q15612 314 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 DCAF12L2Q5VW00 463 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 SLC2A7Q6PXP3 512 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 BPIFB2Q8N4F0 458 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 C10orf53Q8N6V4 93 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 NANPQ8TBE9 248 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 SYNPRQ8TBG9 265 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 SNX33Q8WV41 574 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 TMEM54Q969K7 222 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 OR51B6Q9H340 312 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 TMEM27Q9HBJ8 222 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 NKIRAS2Q9NYR9 191 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 WIPI2Q9Y4P8 454 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 PCDHGB1Q9Y5G3 927 aa16.57■□□□□ 0.24
SMPDL3A-202ENST00000487215 IGHV1-69-2A0A0G2JMI3 117 aa16.56■□□□□ 0.24
SMPDL3A-202ENST00000487215 C11orf98E9PRG8 122 aa16.56■□□□□ 0.24
SMPDL3A-202ENST00000487215 TMPRSS2O15393 492 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms