RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 MT-ND1P03886 318 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 THRBP10828 461 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 UMPSP11172 480 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 B4GALT1P15291 398 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF14P17017 642 aaPredicted RBP16.52■□□□□ 0.24
CLIP2-206ENST00000487091 KDELR2P33947 212 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 TAS2R41P59536 307 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 VLDLRP98155 873 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 GUCY1A3Q02108 690 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF566Q969W8 418 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 DOK1Q99704 481 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 VRK1Q99986 396 aaPredicted RBP16.52■□□□□ 0.24
CLIP2-206ENST00000487091 NOX3Q9HBY0 568 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 ZNF224Q9NZL3 707 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 ADAM21Q9UKJ8 722 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 FBXL3Q9UKT7 428 aa16.52■□□□□ 0.24
CLIP2-206ENST00000487091 hCG_2039718K7EN88 272 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 UBL3O95164 117 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 BCL10O95999 233 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 TNFRSF1BP20333 461 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 USF1P22415 310 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-206ENST00000487091 NR4A1P22736 598 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 PIGFQ07326 219 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 DAG1Q14118 895 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 HSP90B2PQ58FF3 399 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 LRFN4Q6PJG9 635 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 DEF8Q6ZN54 512 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 NANOGNBQ7Z5D8 188 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 HIPK1Q86Z02 1210 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 NKAIN4Q8IVV8 208 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 OR2T12Q8NG77 320 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 RAB1BQ9H0U4 201 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 SPEF1Q9Y4P9 236 aa16.51■□□□□ 0.23
CLIP2-206ENST00000487091 ANK3Q12955 4377 aaKnown RBP16.5■□□□□ 0.23
CLIP2-206ENST00000487091 RTTNQ86VV8 2226 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 LOC390937A0A1W2PQ73 354 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 TMEM129A0AVI4 362 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 A8MV72 311 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-206ENST00000487091 KIAA1324LA8MWY0 1029 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-206ENST00000487091 VWC2LB2RUY7 222 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 BLOC1S5-TXNDC5H3BN57 136 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 OR7A10O76100 309 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 PGA4P0DJD7 388 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 PGA3P0DJD8 388 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 ZNF35P13682 527 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 FUT1P19526 365 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 RAB1AP62820 205 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 SNTB2Q13425 540 aaKnown RBP16.5■□□□□ 0.23
CLIP2-206ENST00000487091 PIN1Q13526 163 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-206ENST00000487091 CYBRD1Q53TN4 286 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 SPATA21Q7Z572 469 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 ARPINQ7Z6K5 226 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 MICU2Q8IYU8 434 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 ANKS4BQ8N8V4 417 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 RP9Q8TA86 221 aaKnown RBP16.5■□□□□ 0.23
CLIP2-206ENST00000487091 TMEM255BQ8WV15 326 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 TMEM239Q8WW34 195 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 LIPHQ8WWY8 451 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 SGTBQ96EQ0 304 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 MS4A3Q96HJ5 214 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 MED4Q9NPJ6 270 aa16.5■□□□□ 0.23
CLIP2-206ENST00000487091 ELOVL7A1L3X0 281 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 HTR3EA5X5Y0 456 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 CENPBD1B2RD01 187 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 DHHO43323 396 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 SHOX2O60902 331 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-206ENST00000487091 RAB36O95755 333 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 IGHG1P01857 330 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 OR8G3PP0DMU2 310 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 OR1E2P47887 323 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 PTDSS1P48651 473 aaKnown RBP16.49■□□□□ 0.23
CLIP2-206ENST00000487091 EVX1P49640 407 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 UGT2B15P54855 530 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 SELENOWP63302 87 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 LSM11P83369 360 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLIP2-206ENST00000487091 RPL18Q07020 188 aaKnown RBP16.49■□□□□ 0.23
CLIP2-206ENST00000487091 MELKQ14680 651 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 HIST3H3Q16695 136 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 LRRC23Q53EV4 343 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-206ENST00000487091 C6orf52Q5T4I8 152 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 KRT80Q6KB66 452 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 SKA3Q8IX90 412 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 SLC22A24Q8N4F4 322 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 PFN4Q8NHR9 129 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 NEU4Q8WWR8 484 aaPredicted RBP16.49■□□□□ 0.23
CLIP2-206ENST00000487091 RCN3Q96D15 328 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 PIMREGQ9BSJ6 248 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 ARMCX1Q9P291 453 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 MED31Q9Y3C7 131 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 CMAHPQ9Y471 501 aa16.49■□□□□ 0.23
CLIP2-206ENST00000487091 A0A1W2PRG6 482 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 ERCC1P07992 297 aaPredicted RBP16.48■□□□□ 0.23
CLIP2-206ENST00000487091 QDPRP09417 244 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 TSPAN19P0C672 248 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 MDH1P40925 334 aaKnown RBP16.48■□□□□ 0.23
CLIP2-206ENST00000487091 NR4A2P43354 598 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 GIPRP48546 466 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 ST3GAL3Q11203 375 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 NRN1LQ496H8 165 aa16.48■□□□□ 0.23
CLIP2-206ENST00000487091 CYB5R2Q6BCY4 276 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms