RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 TOXO94900 526 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 KLF8O95600 359 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 C2P06681 752 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FCGR3AP08637 254 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 ADRB3P13945 408 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 ZNF7P17097 686 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 CD9P21926 228 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A4P22310 534 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 RPS3P23396 243 aaKnown RBP eCLIP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 CRABP2P29373 138 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 DRD3P35462 400 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A3P35503 534 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 UGT1A5P35504 534 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SPAM1P38567 509 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SLC26A3P40879 764 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 P2RY2P41231 377 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SLC1A2P43004 574 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 PTGER3P43115 390 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 MAGEA12P43365 314 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TTPAP49638 278 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TAS2R39P59534 338 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 RAB10P61026 200 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 RPS14P62263 151 aaKnown RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SRPXP78539 464 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SEMG2Q02383 582 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 PJVKQ0ZLH3 352 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 RIPK1Q13546 671 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 EIF2B1Q14232 305 aaKnown RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SELPLGQ14242 412 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 ITIH4Q14624 930 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 CHRNA6Q15825 494 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 CST6Q15828 149 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 LINC01620Q4KN68 170 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 EOGTQ5NDL2 527 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 PIP5KL1Q5T9C9 394 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 SLX4IPQ5VYV7 408 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FAM45BPQ6NSW5 357 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FAM151BQ6UXP7 276 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TAS2R42Q7RTR8 314 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 DPY19L4Q7Z388 723 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 HSD11B1LQ7Z5J1 315 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 PIANPQ8IYJ0 282 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 C4orf33Q8N1A6 199 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 OTUD6BQ8N6M0 293 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 OR5AU1Q8NGC0 362 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FAM45AQ8TCE6 357 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TCP10LQ8TDR4 215 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 ADIPOR1Q96A54 375 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FAM131CQ96AQ9 280 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 AKR1E2Q96JD6 320 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 KLF6Q99612 283 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 GPR22Q99680 433 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 OMDQ99983 421 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 TBC1D10AQ9BXI6 508 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FAM96AQ9H5X1 160 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 GPN2Q9H9Y4 310 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 POPDC3Q9HBV1 291 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 ESM1Q9NQ30 184 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 DYRK4Q9NR20 520 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FBXO6Q9NRD1 293 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 UTP6Q9NYH9 597 aaKnown RBP3.3□□□□□ -1.88
PTCD3-216ENST00000487043 NUDT4Q9NZJ9 180 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 MMP17Q9ULZ9 603 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 ACOT9Q9Y305 439 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 PLLPQ9Y342 182 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 OR10H1Q9Y4A9 318 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 FADS3Q9Y5Q0 445 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 AUP1Q9Y679 476 aa3.3□□□□□ -1.88
PTCD3-216ENST00000487043 F5P12259 2224 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 TCF20Q9UGU0 1960 aaKnown RBP3.29□□□□□ -1.88
PTCD3-216ENST00000487043 SZT2Q5T011 3432 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 IGLV3-16A0A075B6K0 115 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 TEX48A0A1B0GUV7 120 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 MFSD2BA6NFX1 497 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 FAM74A7A6NL05 159 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 CYSRT1A8MQ03 144 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 VGLL3A8MV65 326 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 PPIAL4DF5H284 164 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-216ENST00000487043 GOLGA8RI6L899 631 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 K7EQG2 157 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 PDLIM1O00151 329 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 PRMT5O14744 637 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-216ENST00000487043 DUX1O43812 170 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 IDH3BO43837 385 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 OR1I1O60431 355 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 BCAS1O75363 584 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-216ENST00000487043 SORBS2O94875 1100 aaKnown RBP3.29□□□□□ -1.88
PTCD3-216ENST00000487043 KLHL2O95198 593 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 SNX4O95219 450 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 WISP3O95389 354 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-216ENST00000487043 MT-ND1P03886 318 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 SLC35E2BP0CK96 405 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 ANXA3P12429 323 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 HSD17B1P14061 328 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 UQCRC2P22695 453 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 PPP2R1BP30154 601 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 OXTRP30559 389 aa3.29□□□□□ -1.88
PTCD3-216ENST00000487043 CA5AP35218 305 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms