RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 BCKDHBP21953 392 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 GDNFP39905 211 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 P2RX1P51575 399 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 FCN2Q15485 313 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 LINGO2Q7L985 606 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 SLC25A45Q8N413 288 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 OR2G2Q8NGZ5 317 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 CEP76Q8TAP6 659 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 CCDC74AQ96AQ1 378 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 FGF21Q9NSA1 209 aa16.26■□□□□ 0.19
PDLIM7-207ENST00000486828 TMED7-TICAM2A0A0A6YYA0 188 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 SUSD5O60279 629 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 NPIPB7O75200 414 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 WISP1O95388 367 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 STOMP27105 288 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 RAG2P55895 527 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 SNTB2Q13425 540 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 FAM69AQ5T7M9 428 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 LANCL3Q6ZV70 420 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 PLPP5Q8NEB5 264 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 THEM6Q8WUY1 208 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 METTL21AQ8WXB1 218 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 DNASE2BQ8WZ79 361 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 NSMAFQ92636 917 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 SLC25A36Q96CQ1 311 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 DNAJA3Q96EY1 480 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 OR2M2Q96R28 347 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 COMMD4Q9H0A8 199 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 ZNF275Q9NSD4 429 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 AKAP7Q9P0M2 348 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 OR5V1Q9UGF6 321 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 TMED7Q9Y3B3 224 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 SPAG17Q6Q759 2223 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 CEP192Q8TEP8 1941 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 TP53BP1Q12888 1972 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 A0A1B0GTH9 108 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 TMEM212A6NML5 194 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 SMLR1H3BR10 107 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 BCAT2O15382 392 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 ZNF254O75437 659 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 GPANK1O95872 356 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 MT-ND4P03905 459 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 RAB40ALP0C0E4 278 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 MYF5P13349 255 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 ADRA2CP18825 462 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 RPS27P42677 84 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 SOX2P48431 317 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 CCR6P51684 374 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 AFF3P51826 1226 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 CLDN12P56749 244 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 RPL27P61353 136 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 ZXDAP98168 799 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 FAM205BPQ63HN1 556 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 PWWP2BQ6NUJ5 590 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 MTFR2Q6P444 385 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 WDR74Q6RFH5 385 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 BTN2A1Q7KYR7 527 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 LRRTM1Q86UE6 522 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 BMPERQ8N8U9 685 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 OTOSQ8NHW6 89 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 GRPEL2Q8TAA5 225 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 ZNF519Q8TB69 540 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 RAB40AQ8WXH6 277 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 CTSFQ9UBX1 484 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 FKBP7Q9Y680 259 aa16.25■□□□□ 0.19
PDLIM7-207ENST00000486828 TRBV5-7A0A0A0MS05 114 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 A8MVM7 634 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 GABARAPH6UMI1 98 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 SULT1B1O43704 296 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 RAF1P04049 648 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 GIMD1P0DJR0 217 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 DMWDQ09019 674 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 RASGEF1BQ0VAM2 473 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 ACKR1Q16570 336 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 CD276Q5ZPR3 534 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 GRINAQ7Z429 371 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 ADGRG3Q86Y34 549 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 ZNF676Q8N7Q3 588 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 SYNPRQ8TBG9 265 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 GPR119Q8TDV5 335 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 S100A16Q96FQ6 103 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 OR51J1Q9H342 316 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 ZNF768Q9H5H4 540 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 B9D1Q9UPM9 204 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 FOXJ3Q9UPW0 622 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 ETV7Q9Y603 341 aa16.24■□□□□ 0.19
PDLIM7-207ENST00000486828 PRSS37A4D1T9 235 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 DXOO77932 396 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 H2AFB2P0C5Z0 115 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 C1orf140Q5VVS0 124 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 LRRN1Q6UXK5 716 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 COX15Q7KZN9 410 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 ABCA7Q8IZY2 2146 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 PRSS35Q8N3Z0 413 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 SPEM1Q8N4L4 309 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 EID2Q8N6I1 236 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 HYLS1Q96M11 299 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 AMELYQ99218 206 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 ACTR6Q9GZN1 396 aa16.23■□□□□ 0.19
PDLIM7-207ENST00000486828 EMC7Q9NPA0 242 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms