RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SAXO2Q658L1 398 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 HMGN2P46Q86SG4 172 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ANKRD46Q86W74 232 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 PEX5LQ8IYB4 626 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF440Q8IYI8 595 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 KIRREL3Q8IZU9 778 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 TMEM99Q8N816 258 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 OR4F15Q8NGB8 312 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 OR1K1Q8NGR3 316 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 TCP10LQ8TDR4 215 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 WDR60Q8WVS4 1066 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 NEU4Q8WWR8 484 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 CNOT9Q92600 299 aaKnown RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF566Q969W8 418 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 TESCQ96BS2 214 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ZG16BQ96DA0 208 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 NEURL3Q96EH8 262 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 BOD1Q96IK1 185 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ANKRD27Q96NW4 1050 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ZNF385AQ96PM9 386 aaKnown RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 TRNT1Q96Q11 434 aaKnown RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 CPPED1Q9BRF8 314 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 SLC35A5Q9BS91 424 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 MEGF9Q9H1U4 602 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 PLK3Q9H4B4 646 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 MTHFD2LQ9H903 347 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 CACYBPQ9HB71 228 aaKnown RBP5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ADPRHL2Q9NX46 363 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 SLC17A7Q9P2U7 560 aa5.09□□□□□ -1.59
CSDE1-207ENST00000483407 ANK3Q12955 4377 aaKnown RBP5.09□□□□□ -1.6
CSDE1-207ENST00000483407 FREM1Q5H8C1 2179 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 A0A096LPI6 279 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ARPC4-TTLL3A0A0A6YYG9 625 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 LRP5LA4QPB2 252 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 CDHR4A6H8M9 788 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 LIPT2A6NK58 231 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 A8MVM7 634 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 E9PBE3 544 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 hCG_2039718K7EN88 272 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 HMGN4O00479 90 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SPAG7O75391 227 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 AKR7A3O95154 331 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 LGI1O95970 557 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 DBIP07108 87 aaKnown RBP5.08□□□□□ -1.6
CSDE1-207ENST00000483407 GRPP07492 148 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 BPGMP07738 259 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 CECR9P0C854 216 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 MYZAPP0CAP1 466 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 NR2F1P10589 423 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 DAOP14920 347 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 NPR2P20594 1047 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SLC6A2P23975 617 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 GTF2E2P29084 291 aaKnown RBP5.08□□□□□ -1.6
CSDE1-207ENST00000483407 PTTG1IPP53801 180 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 IFFO1Q0D2I5 559 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 LRRC74AQ0VAA2 488 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 EPS8Q12929 822 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SCGB2A2Q13296 93 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 CASP8Q14790 479 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SYPL1Q16563 259 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 MRPL2Q5T653 305 aaKnown RBP5.08□□□□□ -1.6
CSDE1-207ENST00000483407 PRAMEF8Q5VWM4 474 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 PRAMEF7Q5VXH5 474 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 WBP2NLQ6ICG8 309 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 NIPAL3Q6P499 406 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ANKRD16Q6P6B7 361 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 C12orf54Q6X4T0 127 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 LRRC74BQ6ZQY2 392 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SPATA21Q7Z572 469 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 RNF130Q86XS8 419 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 NUDCD3Q8IVD9 361 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 CADM2Q8N3J6 435 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ANKFN1Q8N957 763 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ZIC4Q8N9L1 334 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 NUP37Q8NFH4 326 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 MAGEE2Q8TD90 523 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ST8SIA2Q92186 375 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 PPP1R36Q96LQ0 422 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ALKBH3Q96Q83 286 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-207ENST00000483407 LRRC37BQ96QE4 947 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 PANX1Q96RD7 426 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SPATA5L1Q9BVQ7 753 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SLC38A1Q9H2H9 487 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ARMC7Q9H6L4 198 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 ZNF442Q9H7R0 627 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 DYNLRB1Q9NP97 96 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 CALML5Q9NZT1 146 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 CRNNQ9UBG3 495 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-207ENST00000483407 BTNL2Q9UIR0 455 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 RASD1Q9Y272 281 aa5.08□□□□□ -1.6
CSDE1-207ENST00000483407 SLCO1B7G3V0H7 640 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 NR5A2O00482 541 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 AKAP8O43823 692 aaKnown RBP5.07□□□□□ -1.6
CSDE1-207ENST00000483407 PRSS23O95084 383 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 AHSA1O95433 338 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 KRT75O95678 551 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 IGKV3-15P01624 115 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 IGLV1-44P01699 117 aa5.07□□□□□ -1.6
CSDE1-207ENST00000483407 CSTBP04080 98 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms