RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	B3GAT2	Q9NPZ5	323 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	TBC1D23	Q9NUY8	699 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	UPB1	Q9UBR1	384 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	MALT1	Q9UDY8	824 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	IER3IP1	Q9Y5U9	82 aa		13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	SETX	Q7Z333	2677 aa	Known RBP	13.57	□□□□□ -0.24
CCM2-215	ENST00000482714	RELN	P78509	3460 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	ZG16	O60844	167 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	TRMU	O75648	421 aa	Known RBP	13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	SERPINI2	O75830	405 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	AGFG2	O95081	481 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	PEX19	P40855	299 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF133	P52736	654 aa	Predicted RBP	13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	MYBPC1	Q00872	1141 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	NPRL3	Q12980	569 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	ITGAD	Q13349	1161 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	PTGES3	Q15185	160 aa	Known RBP	13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF519	Q8TB69	540 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	TMEM54	Q969K7	222 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	BOD1	Q96IK1	185 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF570	Q96NI8	536 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	TSPAN32	Q96QS1	320 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	EMC6	Q9BV81	110 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	GABARAPL3	Q9BY60	117 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	PRRG3	Q9BZD7	231 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	VCX	Q9H320	206 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	C12orf49	Q9H741	205 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC25A19	Q9HC21	320 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	ASB6	Q9NWX5	421 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	GLTP	Q9NZD2	209 aa		13.56	□□□□□ -0.24
CCM2-215	ENST00000482714	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.56	□□□□□ -0.24
CCM2-215	ENST00000482714		H0YJX3	145 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	SOCS2	O14508	198 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	KRT33A	O76009	404 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ATP6V1G2	O95670	118 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	PGA4	P0DJD7	388 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	PGA3	P0DJD8	388 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	GRK5	P34947	590 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	CSNK1A1	P48729	337 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ASCL1	P50553	236 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	TGFBR3	Q03167	851 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	CAMK2D	Q13557	499 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	GINS1	Q14691	196 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	TSPO2	Q5TGU0	170 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ANKRD34A	Q69YU3	496 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	IGFN1	Q86VF2	1251 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	GPR137C	Q8N3F9	429 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	RELL2	Q8NC24	303 aa	Predicted RBP	13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	OR6N1	Q8NGY5	312 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	SSC4D	Q8WTU2	575 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714		Q96M85	177 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	KCNK17	Q96T54	332 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	PLA2G12A	Q9BZM1	189 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	OR10A4	Q9H209	315 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	VCX3B	Q9H321	246 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	IL20RA	Q9UHF4	553 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	KLHL21	Q9UJP4	597 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ADAM18	Q9Y3Q7	739 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	LRRK2	Q5S007	2527 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	PRSS37	A4D1T9	235 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ARHGEF9	O43307	516 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	SOX14	O95416	240 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	PPP1R3D	O95685	299 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	IFNG	P01579	166 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	PAX7	P23759	505 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	POU1F1	P28069	291 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	CLRN1	P58418	232 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	CLEC12A	Q5QGZ9	265 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	SSX8	Q7RTT4	187 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	GABRG1	Q8N1C3	465 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	UBE2J2	Q8N2K1	259 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	OR8D4	Q8NGM9	314 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	RNASE6	Q93091	150 aa	Known RBP	13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC7A10	Q9NS82	523 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	VSX1	Q9NZR4	365 aa	Predicted RBP	13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	GPR52	Q9Y2T5	361 aa		13.55	□□□□□ -0.24
CCM2-215	ENST00000482714	TEX13C	A0A0J9YWL9	993 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	ZAR1L	A6NP61	321 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	ZNF587B	E7ETH6	402 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	UPK3A	O75631	287 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	HOXB1	P14653	301 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	PSMB1	P20618	241 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	MPG	P29372	298 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	SH3BGR	P55822	239 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	MELK	Q14680	651 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	PGGHG	Q32M88	737 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	NRN1L	Q496H8	165 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	LPCAT4	Q643R3	524 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	OR7E24	Q6IFN5	339 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	TRUB1	Q8WWH5	349 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	HDAC2	Q92769	488 aa	Known RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	SLC38A2	Q96QD8	506 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	DDO	Q99489	341 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	GRIP2	Q9C0E4	1043 aa		13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.54	□□□□□ -0.24
CCM2-215	ENST00000482714	CMC2	Q9NRP2	79 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms