RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 AGBL5Q8NDL9 886 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ARL5BQ96KC2 179 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 DDOQ99489 341 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 PTDSS2Q9BVG9 487 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 SRA1Q9HD15 236 aaKnown RBP13.06□□□□□ -0.32
CHD3-211ENST00000481999 ST6GALNAC2Q9UJ37 374 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 A0A1W2PPK0 400 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 EEF1E1O43324 174 aaKnown RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 LANCL1O43813 399 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 SUSD5O60279 629 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 FGF5P12034 268 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 SPI1P17947 270 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 MESTQ5EB52 335 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 TSPAN32Q96QS1 320 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 ING1Q9UK53 422 aaPredicted RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 HIF3AQ9Y2N7 669 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 PTRH2Q9Y3E5 179 aaKnown RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 OR6C76A6NM76 312 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 FZD7O75084 574 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 KLF7O75840 302 aaPredicted RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 ARL6IP5O75915 188 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 SYPP08247 313 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 OR2T7P0C7T2 308 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 TFPIP10646 304 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 P2RX1P51575 399 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 GBX2P52951 348 aaPredicted RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 MRPL28Q13084 256 aaKnown RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 SLC25A35Q3KQZ1 300 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 PRAMEF20Q5VT98 475 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 NANOGNBQ7Z5D8 188 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 OR2T27Q8NH04 317 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 ABHD1Q96SE0 405 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 CNN2Q99439 309 aaKnown RBP13.05□□□□□ -0.32
CHD3-211ENST00000481999 TMEM185BQ9H7F4 350 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 MYOTQ9UBF9 498 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
CHD3-211ENST00000481999 TMED7-TICAM2A0A0A6YYA0 188 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 A0A1W2PRG6 482 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 YKT6O15498 198 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 OGG1O15527 345 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 HLA-DOBP13765 273 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 UQCRC1P31930 480 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 PSMB10P40306 273 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 CBFBQ13951 182 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 SLC6A19Q695T7 634 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 FAM198BQ6UWH4 519 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 WDFY1Q8IWB7 410 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 DTX3Q8N9I9 347 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 SMIM19Q96E16 107 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 NDEL1Q9GZM8 345 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 TAS2R5Q9NYW4 299 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 ABRACLQ9P1F3 81 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 SLC6A5Q9Y345 797 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 TMED7Q9Y3B3 224 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 FREM3P0C091 2139 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 CNOT1A5YKK6 2376 aaKnown RBP13.04□□□□□ -0.32
CHD3-211ENST00000481999 A0A1W2PQD3 144 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 TVP23AA6NH52 213 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 NOTOA8MTQ0 251 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 H3BML4 177 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 DHFRP00374 187 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 MAGEB1P43366 347 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 LGALS3BPQ08380 585 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 GGTLC2Q14390 218 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 CDK5R1Q15078 307 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 NTRK2Q16620 822 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 THOC7Q6I9Y2 204 aaKnown RBP13.04□□□□□ -0.32
CHD3-211ENST00000481999 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.04□□□□□ -0.32
CHD3-211ENST00000481999 SYT9Q86SS6 491 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 THAP4Q8WY91 577 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 ORAI1Q96D31 301 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 SLC19A3Q9BZV2 496 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 SYT4Q9H2B2 425 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 TAS2R10Q9NYW0 307 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 KLRF1Q9NZS2 232 aa13.04□□□□□ -0.32
CHD3-211ENST00000481999 URB1O60287 2271 aaKnown RBP13.03□□□□□ -0.32
CHD3-211ENST00000481999 A0A1B0GVC2 190 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 A6NIN4 97 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 H3BSH0 61 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 FLRT2O43155 660 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 UBL3O95164 117 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 LDOC1O95751 146 aaPredicted RBP13.03□□□□□ -0.32
CHD3-211ENST00000481999 BGLAPP02818 100 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 CD14P08571 375 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 GP1BBP13224 206 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 PGCP20142 388 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 GDI2P50395 445 aaKnown RBP13.03□□□□□ -0.32
CHD3-211ENST00000481999 PRPS1P60891 318 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 PITPNAQ00169 270 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 LINC01590Q5TEZ4 76 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 TMEM205Q6UW68 189 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 KRT74Q7RTS7 529 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 KLHDC2Q9Y2U9 406 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 G3V3Y1 287 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 SLC25A12O75746 678 aa13.03□□□□□ -0.32
CHD3-211ENST00000481999 GATBO75879 557 aaKnown RBP13.03□□□□□ -0.32
CHD3-211ENST00000481999 CD1AP06126 327 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms