RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TGM4P49221 684 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 NHLRC2Q8NBF2 726 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 OR52A1Q9UKL2 312 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 H0YIV9 168 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 TUSC2O75896 110 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CLDN2P57739 230 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 PITX1P78337 314 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 REEP5Q00765 189 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 RTL8BQ17RB0 113 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 AVPI1Q5T686 147 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 FAM122AQ96E09 287 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 MOB1AQ9H8S9 216 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 C1GALT1Q9NS00 363 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 PLXNA1Q9UIW2 1896 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 FLI1Q01543 452 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CLLU1OSQ5K130 101 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 MDGA2Q7Z553 956 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 TMEM200AQ86VY9 491 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 FAM213BQ8TBF2 198 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 NKX2-4Q9H2Z4 354 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 KIAA1456Q9P272 454 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 DNMT3BQ9UBC3 853 aaKnown RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CD68P34810 354 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 FCRLAQ7L513 359 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 OR4F15Q8NGB8 312 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 LRFN5Q96NI6 719 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 LYRM4Q9HD34 91 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 PKD1L3Q7Z443 1732 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF814B7Z6K7 855 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CA3P07451 260 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CARD18P57730 90 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 METTL4Q8N3J2 472 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 NDRG4Q9ULP0 352 aaKnown RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 UTS2O95399 124 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 BLVRBP30043 206 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 IL20RBQ6UXL0 311 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 SLC30A3Q99726 388 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 SEMA4CQ9C0C4 833 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.84□□□□□ -0.999e-6■□□□□ 9.4
VEGFA-212ENST00000480614 MBLAC1A4D2B0 266 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 TRAF3IP2O43734 574 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 AP1G1O43747 822 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZIC2O95409 532 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 EBPQ15125 230 aaKnown RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 Q499Y3 187 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 FRMPD2BQ6IN97 320 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 DPPA2Q7Z7J5 298 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF296Q8WUU4 475 aaPredicted RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 SCG5P05408 212 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CR2P20023 1033 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 TNFRSF1BP20333 461 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZXDBP98169 803 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZADH2Q8N4Q0 377 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 ZNF480Q8WV37 535 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 BARHL1Q9BZE3 327 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 EXOSC3Q9NQT5 275 aaKnown RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 MEIS3P1A6NDR6 274 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 BHLHE40O14503 412 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 SGCEO43556 437 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 FBXO24O75426 580 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 CDONQ4KMG0 1287 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 PARS2Q7L3T8 475 aaKnown RBP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 TOX2Q96NM4 488 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 NDFIP1Q9BT67 221 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 MED16Q9Y2X0 877 aa8.84□□□□□ -0.99
VEGFA-212ENST00000480614 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
VEGFA-212ENST00000480614 DVL1O14640 695 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 PTGESO14684 152 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 TXNL1O43396 289 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 PAX6P26367 422 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 DVL1P1P54792 670 aaPredicted RBP8.84□□□□□ -1
VEGFA-212ENST00000480614 SNRPGP62308 76 aaKnown RBP8.84□□□□□ -1
VEGFA-212ENST00000480614 EMX1Q04741 257 aaPredicted RBP8.84□□□□□ -1
VEGFA-212ENST00000480614 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.84□□□□□ -11e-8■■■■■ 46.2
VEGFA-212ENST00000480614 IL34Q6ZMJ4 242 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 CDC20BQ86Y33 519 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 KCNRGQ8N5I3 272 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 DUSP19Q8WTR2 217 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 SLC35E1Q96K37 410 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 ZNF583Q96ND8 569 aa8.84□□□□□ -1
VEGFA-212ENST00000480614 ZNF582Q96NG8 517 aaPredicted RBP8.84□□□□□ -1
VEGFA-212ENST00000480614 RRP8O43159 456 aaKnown RBP8.83□□□□□ -1
VEGFA-212ENST00000480614 F2RP25116 425 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 C1orf87Q8N0U7 546 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 FGF13Q92913 245 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 SLC35A4Q96G79 324 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 RBFOX1Q9NWB1 397 aaKnown RBP8.83□□□□□ -1
VEGFA-212ENST00000480614 SCRG1O75711 98 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 TRHRP34981 398 aaPredicted RBP8.83□□□□□ -1
VEGFA-212ENST00000480614 PHYHD1Q5SRE7 291 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 OR6K3Q8NGY3 331 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 GIMAP1Q8WWP7 306 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 GTF2H4Q92759 462 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 NOX4Q9NPH5 578 aa8.83□□□□□ -1
VEGFA-212ENST00000480614 MRPS2Q9Y399 296 aaKnown RBP8.83□□□□□ -1
VEGFA-212ENST00000480614 CLEC3BP05452 202 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms